DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetA and ntng2a

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_009302069.1 Gene:ntng2a / 560014 ZFINID:ZDB-GENE-081105-186 Length:1256 Species:Danio rerio


Alignment Length:405 Identity:98/405 - (24%)
Similarity:154/405 - (38%) Gaps:127/405 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIRGILLLLLGTTRFSPIQCI-----SNDVYFKMFSQQAPPEDPCYNKAHEPRACIP------DF 54
            |:...||||         |||     ..|:...:.|....|....|       ||.|      ::
Zfish     9 MLSQALLLL---------QCIILTLGQYDICKSLVSTDDGPTWEYY-------ACQPKPMSMKEY 57

  Fly    55 VNAAYDAPVVASSTCGSSGAQRYCEYQDHERSCHTCDMTDPLRSFPARSLTDLNNSNNVTCWRS- 118
            :....:.|.:   |||:. .:|||..::.......||.:....:.|...:.|...:..:|.|:: 
Zfish    58 MQIRVEPPDI---TCGNP-PERYCTLENPYLCSDECDASTKELAHPPELMQDSERTGLITYWQTV 118

  Fly   119 ------EPVTGSGDNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIYKSTDHGLSWQPFQFFSS 177
                  ||:..:     ::||..|..|||..| |:.....||..||:.||.::|.:|||:|:::.
Zfish   119 TWSRYPEPLLAN-----ISLSWNKSLELTDDI-QISFEYGRPTIMVLDKSLNYGRTWQPYQYYAD 177

  Fly   178 QCRRLFGRPARQSTGRHNEHEARCSDVTRPLVSRI----AFSTLEGRPSSRD------------- 225
            .|...||..|:           |..|::...|:|:    .:|...|..:.::             
Zfish   178 DCMEAFGMLAK-----------RVQDLSATNVTRVICTEQYSRWVGSKNEKNVRFEVRERFAIFA 231

  Fly   226 -------------LDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLA 277
                         ::|...|:|:.|.|::|:   ||.||                          
Zfish   232 GAKLQNMDNLYTRMESMKGLRDFFTFTNLRL---RLLRP-------------------------- 267

  Fly   278 NGPAGNNIEANLGGDVATSGSGL--HYAISDFSVGGRCKCNGHASKCSTDASGQLNCECSHNTAG 340
                      .|||......:.|  .||||:..:..|||||.||.:||. ..|.|.|:|.|||.|
Zfish   268 ----------ALGGTYVQKDNLLKYFYAISNIDIPARCKCNLHAGQCSL-RDGTLQCDCEHNTTG 321

  Fly   341 RDCERCKPFHFDRPW 355
            :||..|:.....:.|
Zfish   322 QDCLVCERGFKAKSW 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532 57/278 (21%)
EGF_Lam 312..357 CDD:238012 21/44 (48%)
EGF_Lam 369..426 CDD:238012
EGF_Lam 431..479 CDD:238012
NTR_netrin-1_like 545..723 CDD:239634
ntng2aXP_009302069.1 Laminin_N 68..291 CDD:295486 61/279 (22%)
EGF_Lam 294..340 CDD:238012 21/44 (48%)
E_Pc_C <377..483 CDD:284226
EGF_Lam 1084..1132 CDD:238012
Laminin_EGF 1140..1187 CDD:278482
EGF_2 1187..1217 CDD:285248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3512
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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