DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetA and lamb2l

DIOPT Version :10

Sequence 1:NP_511154.3 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_692838.6 Gene:lamb2l / 553337 ZFINID:ZDB-GENE-030131-4205 Length:1836 Species:Danio rerio


Alignment Length:728 Identity:194/728 - (26%)
Similarity:291/728 - (39%) Gaps:220/728 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PRACIPDFVNAAYDAP----------VVASSTCGSSGAQRYC---EYQDHERSCHTCDMTDPLRS 98
            |..|:.   .:.|.|.          :..|||||..|.:.||   ..:|.|: |..||..:|   
Zfish    24 PHGCMD---GSCYPATGNLLIGRAINLTTSSTCGLDGPEPYCIVSHLKDSEK-CFICDSENP--- 81

  Fly    99 FPARSLTDLNNSNNV----------TCWRSEPVTGSGDNVTLTLSLGKKFELTYVILQLCPHAPR 153
            :.|....|.:...||          |.|::  |.|. :||::.|:|..:|..|::|::.  ...|
Zfish    82 YDANYHRDSHRVENVIYPMDSTGELTWWQA--VNGE-ENVSVRLNLEAEFHFTHLIMKF--KTFR 141

  Fly   154 PDSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTGRHNE--HEARCSDVTRPLVSRIAFST 216
            |.:|:|.:|:|.|.:|:.:::|:..|.:.|.|....|....:|  .|.|.||:.......:.:..
Zfish   142 PAAMIIERSSDFGRTWRIYRYFAYNCTKTFPRVPAHSLRFIDEVICEERYSDIEPSTDGEVIYKV 206

  Fly   217 LEGRPSSRD---LDSSPVLQDWVTATDIRVVFHRL---------QRPDPQALLSLEAGGATDLAS 269
            |:.....:|   ||    :||.:..|::|:.|.:|         :|||               ..
Zfish   207 LDPAIHVKDPYSLD----IQDLLRITNLRINFTKLHTLGDNLLDRRPD---------------VL 252

  Fly   270 GKYSVPLANGPAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKC------STDASG 328
            .||                            :||:.:..|.|.|.|.||||:|      :|..||
Zfish   253 QKY----------------------------YYALYELVVRGSCFCYGHASECAPVPGVTTRDSG 289

  Fly   329 QLN--CECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLSQGV 391
            .::  |.|.|||.|.:||||:.|:.|.||..|....|:.|:|||||.|:.||.|:|.::..:..|
Zfish   290 MIHGRCVCKHNTVGLNCERCRDFYHDAPWRPAETDNAHTCRECNCNGHSNQCHFDMAVYLATGNV 354

  Fly   392 SGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGS-SGKICNS--------T 447
            |||||.||.|:|.||||..||..:|:|..|.:.....|..|||.|:|| .|.:|:|        .
Zfish   355 SGGVCNNCLHNTMGRNCESCKPFYYQDPEKDIRDPAACVPCDCDPVGSVEGGVCDSHTDLDLGMI 419

  Fly   448 SGQCPCKDGVTGLTCNRCARG-YQQSRSHIAPCIKQP----PRMINMLDTQNTAPEPDEPESSPG 507
            .|||.||..|.|..|:.|..| |..|......|  ||    ||.|..|..      |.:..|   
Zfish   420 GGQCRCKQNVRGQRCDYCKEGHYGLSLDDPLGC--QPCNCDPRGITTLGV------PCDQIS--- 473

  Fly   508 SGGDRNGAAGMAAQSQYYRTEGGRECGKCRVSTKRLNLN----KFCKRDYAIMAKVIGRDTSSEA 568
              ||        ...:.|.|  ||.|.:|......|:.:    :.|..|:       |..|||  
Zfish   474 --GD--------CSCKRYVT--GRYCNQCLPEYWGLSHDLAGCRPCNCDF-------GGATSS-- 517

  Fly   569 VSREVQRRAMD-------PDVADYEMDQVQPGSARSPITGVYEFQA--------ADYPNP-NPNP 617
                  |..||       |.:...:..:|||....:.: ..|:::|        .|...| :|.|
Zfish   518 ------RCMMDSGQCDCRPHLIGRQCSEVQPAFFCASL-DYYKYEAEAVMGRSPEDLTLPGSPRP 575

  Fly   618 RG---------------------SEMERFDLQ----------IQAVFKRSRPGE----------- 640
            :.                     ::.:|..|:          :.:|.:..:||:           
Zfish   576 QAETDCVQHLNNQLRRHRRHRHIAQQQRAALRRIRQLQQTPSVSSVHRERQPGQMVTWTGPGFAR 640

  Fly   641 -SSGAGNVYGMPN 652
             ..|||..:.:.|
Zfish   641 VKDGAGLEFAISN 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_511154.3 LamNT 44..280 CDD:214532 66/269 (25%)
EGF_Lam 312..357 CDD:238012 24/52 (46%)
EGF_Lam 369..426 CDD:238012 28/56 (50%)
EGF_Lam 431..479 CDD:238012 21/57 (37%)
NTR_netrin-1_like 545..723 CDD:239634 28/171 (16%)
lamb2lXP_692838.6 Laminin_N 32..266 CDD:459653 67/289 (23%)
EGF_Lam 267..320 CDD:238012 24/52 (46%)
EGF_Lam 332..384 CDD:238012 27/51 (53%)
Laminin_EGF 395..452 CDD:395007 21/56 (38%)
EGF_Lam 454..505 CDD:238012 16/71 (23%)
EGF_Lam 506..>545 CDD:238012 13/53 (25%)
EGF_Lam 816..861 CDD:214543
Laminin_EGF 864..912 CDD:395007
EGF_Lam 910..954 CDD:238012
Laminin_EGF 960..1016 CDD:395007
Laminin_EGF 1019..1063 CDD:395007
Laminin_EGF <1089..1129 CDD:395007
EGF_Lam 1126..1168 CDD:238012
Laminin_EGF 1175..1215 CDD:395007
COG4372 1245..>1436 CDD:443500
Mplasa_alph_rch 1492..>1818 CDD:275316
cc_LAMB_C 1766..1835 CDD:411969
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.