DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetA and trol

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001027038.3 Gene:trol / 45320 FlyBaseID:FBgn0284408 Length:4479 Species:Drosophila melanogaster


Alignment Length:824 Identity:156/824 - (18%)
Similarity:253/824 - (30%) Gaps:295/824 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SNDVYFKMFSQQAPPED---PCYNKAHEPRACIPDFVNAAYDA-PVVASSTC------------- 69
            ||:  |....||:|..|   .| |:.:..|.|  :...|.|.. |:.|...|             
  Fly  1942 SNN--FASGCQQSPDGDVVCRC-NEGYTGRRC--EQCAAGYQGNPLAAGGICRRIPDTSCNVDGT 2001

  Fly    70 ---GSSGAQRYCEYQDH--ERSCHTCDMTDPLRSFPARSLTDLNNSNNVTCWRS------EPVTG 123
               .|:|.   |:.:|.  ...|.||..    :||...|.|   .:..:.|:.|      :..|.
  Fly  2002 YSVHSNGT---CQCKDSVIGEQCDTCKS----KSFHLNSFT---YTGCIECFCSGVGLDCDSSTW 2056

  Fly   124 SGDNVTLTLSLGK---KFELTYVILQLCPH------APRPDSMVIYKSTDHG---LSWQ-PFQFF 175
            ..|.||.|....:   .|.|....:|..|.      |..|:::....|.|..   |.|. |..|.
  Fly  2057 YRDQVTSTFGRSRVDHGFVLVTNYMQPTPDTVPVSMAAEPNALSFIGSADQSGNTLYWSLPAAFL 2121

  Fly   176 SSQCRRLFGRPARQSTGRHNEHEARCSDVTRPLVSRIAFSTLEGRPSSRDLDSSPVLQDWVTATD 240
            .::.....|:                      |...:::|.|.....||:.....|::   :..|
  Fly  2122 GNKLSSYGGK----------------------LTYTLSYSPLPNGIMSRNSAPDVVIK---SGED 2161

  Fly   241 IRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLANGPAGNNIEANLGGDVATSGSGLHYAIS 305
            :|::.:|..:..|.             .:..|||.:...      ....|.:|..:...:..|:|
  Fly  2162 LRLIHYRKSQVVPS-------------VANTYSVEIKES------AWQRGDEVVANREHVLMALS 2207

  Fly   306 DFSV----GGRCKCNGHAS--KCSTDASGQLN-----------CECSHNTAGRDCERCKPFHFDR 353
            |.:.    .........||  :.:.|.:...|           |.|.....|..||:|.|.:...
  Fly  2208 DITAIYIKATYTTSTKEASLRQVTLDVATPTNLGTPRAVEVEQCRCPEGYLGLSCEQCAPGYARD 2272

  Fly   354 PWARATAKEA----NECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEG 414
            |       |.    ..|:.|.||.|::.|..:.           |.|:.|..:|.|.:|.:|..|
  Fly  2273 P-------EGGIYLGLCRPCECNGHSKYCNSDT-----------GDCEECSDNTEGPSCERCAAG 2319

  Fly   415 FYRDATKPLTHRKVCKACDCHPIGSSGKICNST----------------SGQCPCKDGVTGLTCN 463
            :..|||:...:.  |:..:.:||.|.....|.|                ..:|.||..|.|..|:
  Fly  2320 YVGDATRGTIYD--CQPDEGYPIPSPPAPGNQTLECTAYCQIEGIYDCRGNECLCKRNVIGDQCD 2382

  Fly   464 RCARGYQQSRSHIAPCIKQPPRMINMLDTQNTAPEPDEPESSPGSGGDRNGAAGMAAQSQYYRTE 528
            :|                                              |.|..|::||:|    :
  Fly  2383 QC----------------------------------------------RPGTYGLSAQNQ----D 2397

  Fly   529 GGREC------GKCRVSTKRLNLNKFCKRDYAIMAKVIGRDTSSEAVSREVQRRAMDPDVA---- 583
            |.:||      .:||.:..   ..:....|:.:.|.:|   |......::.:.  :.||::    
  Fly  2398 GCKECYCSGLASQCRSAAL---YRQLIPVDFILNAPLI---TDESGAVQDTEN--LIPDISRNMY 2454

  Fly   584 DYEMDQVQP--GSARSPITG----------VYEFQAADYPNPN----------------PNPRGS 620
            .|......|  .|.|..:.|          .|......|.|..                ..|.|:
  Fly  2455 TYTHTSYLPKYWSLRGSVLGNQLFSYGGRLSYSLIVESYGNYERGHDIVLIGNGLKLIWSRPDGN 2519

  Fly   621 E-MERFDLQ-----------------------------IQAVFKRSR---PGESSGAGNVYGMPN 652
            | .|.::::                             :|.:..|:.   |.:|:..|||. :.:
  Fly  2520 ENQEEYNVRLHEDEQWTRQDRESARPASRSDFMTVLSDLQHILIRATPRVPTQSTSIGNVI-LES 2583

  Fly   653 TTLKRGPMTWIIPTKDLE-CRCPRIRVNRSYLILGRDSEAPPGY 695
            ....|.|  ......|:| |:||     ..|:....:|.||..|
  Fly  2584 AVTTRTP--GATHASDIELCQCP-----SGYVGTSCESCAPLHY 2620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532 51/273 (19%)
EGF_Lam 312..357 CDD:238012 12/57 (21%)
EGF_Lam 369..426 CDD:238012 16/56 (29%)
EGF_Lam 431..479 CDD:238012 12/63 (19%)
NTR_netrin-1_like 545..723 CDD:239634 37/217 (17%)
trolNP_001027038.3 LDLa 447..480 CDD:238060
LDLa 532..564 CDD:238060
LDLa 571..606 CDD:238060
LDLa 616..650 CDD:238060
LDLa 704..739 CDD:238060
LDLa 813..847 CDD:238060
LDLa 852..887 CDD:238060
LDLa 902..936 CDD:238060
LDLa 956..990 CDD:238060
LDLa 997..1030 CDD:238060
LDLa 1033..1067 CDD:238060
LDLa 1072..1105 CDD:238060
LDLa 1133..1165 CDD:238060
LDLa 1182..1215 CDD:238060
LDLa 1221..1251 CDD:238060
LDLa 1252..1286 CDD:238060
LDLa 1292..1326 CDD:238060
IG 1344..1421 CDD:214652
Ig 1344..1405 CDD:299845
LDLa 1439..1473 CDD:238060
LDLa 1479..1513 CDD:238060
LDLa 1522..1556 CDD:238060
IG_like 1566..1649 CDD:214653
Ig_Perlecan_D2_like 1574..1649 CDD:143220
Laminin_B 1748..1864 CDD:278481
EGF_Lam 1935..1989 CDD:238012 15/51 (29%)
Laminin_B 2113..2238 CDD:278481 25/168 (15%)
EGF_Lam <2250..2276 CDD:238012 9/32 (28%)
EGF_Lam 2284..2333 CDD:238012 16/61 (26%)
Laminin_EGF <2369..2399 CDD:278482 13/79 (16%)
Laminin_B 2465..2587 CDD:278481 17/122 (14%)
I-set 2686..2772 CDD:254352
Ig_2 2689..2771 CDD:290606
Ig 2779..2865 CDD:299845
IG_like 2798..2864 CDD:214653
Ig 2882..2965 CDD:299845
IG_like 2882..2950 CDD:214653
Ig 2977..3061 CDD:299845
IG_like 2984..3058 CDD:214653
IG_like 3074..3152 CDD:214653
Ig 3086..3153 CDD:299845
I-set 3155..3243 CDD:254352
IGc2 3171..3233 CDD:197706
IG 3371..3447 CDD:214652
IGc2 3377..3437 CDD:197706
Ig 3456..3534 CDD:299845
IG 3465..>3526 CDD:214652
Ig 3603..3665 CDD:299845
IG 3610..3683 CDD:214652
IG 3696..3762 CDD:214652
Ig 3704..3771 CDD:299845
LamG 3784..3929 CDD:238058
EGF 3952..3984 CDD:278437
LamG 4032..4185 CDD:238058
Laminin_G_2 4315..4444 CDD:280389
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445136
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10574
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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