DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetA and wb

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster


Alignment Length:674 Identity:174/674 - (25%)
Similarity:275/674 - (40%) Gaps:142/674 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SNDVYFKMFSQQAPPEDPCYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYCEYQDHERS 86
            :.|||...||....|  |.:|..  |||.|.  |||          |||.:||:.||: |...:.
  Fly   141 TEDVYSSSFSGGLYP--PLFNVV--PRAQIS--VNA----------TCGQNGAEEYCK-QVGAKP 188

  Fly    87 CHTCDMTDPLRSFPARSLTDLNNSNNVT---------CWRSEPVTGSG--DNVTLTLSLGKKFEL 140
            |..|:.....|: ..||:..|.:|.:.:         .|:|..:.|..  :.||:.|.|.:.|::
  Fly   189 CGICNAHSSDRA-KQRSIQSLISSGSGSGSGSGFEEGWWQSPTLQGGRQFEYVTILLDLKQTFQI 252

  Fly   141 TYVILQLCPHAPRPDSMVIYKSTDHGLSWQPFQFF---SSQCRRLFGRPARQSTGRH---NEHEA 199
            ..|.|: ..::|||.|.::.||.| |::::|:|:|   .:.|:|.:....:  .|::   |:.|.
  Fly   253 FSVWLK-SANSPRPASWILEKSLD-GINFEPWQYFGLSDADCQRRWNLSGQ--NGKYVFQNDTEI 313

  Fly   200 RCS---DVTRPLVSRIAF-STLEGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLE 260
            .||   ....||.:.:.. |.|:.||.:  .|.||.|..::|...||:   |||           
  Fly   314 ICSTQFSKPGPLENGVLHASLLKNRPGA--TDQSPELMKFITTRYIRI---RLQ----------- 362

  Fly   261 AGGATDLASGKYSVPLANGPAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTD 325
                     |.:|.  ||  ..|:::..|  |..:......|::|...|..|..|||||::....
  Fly   363 ---------GMHST--AN--QDNSLDWLL--DSPSLEKHSFYSLSQLKVSARLDCNGHANRSHES 412

  Fly   326 ASGQL-NCECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLSQ 389
            ....| .|.|.|||.|..||:|.|...|||:     :...||:.|.|..||..|.::..:.:   
  Fly   413 PDDPLMQCICQHNTCGAQCEQCCPLFQDRPY-----QMGGECEICQCYGHAESCTYDPFLDK--- 469

  Fly   390 GVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGKICNSTSGQCPCK 454
                |:||:|.::|.|..|..|:.||||:...|||  ..|..|.|:|..|:|. |.|..|.|.|.
  Fly   470 ----GICQSCSNNTAGIECEFCEMGFYRELDAPLT--DPCLPCSCNPARSTGG-CQSDGGSCNCL 527

  Fly   455 DGVTGLTCNRCARGYQQSRSHIAPCIKQPPRMINMLDTQNTAPEPDEPESSPGSGGDRNGAAGMA 519
            :|..|..|..||.||.........|                    || ..|.||.|..:|.....
  Fly   528 EGFQGKNCEECAPGYYGDDCKRCEC--------------------DE-RGSLGSTGSCSGVCQCK 571

  Fly   520 AQSQ----------YY--RTEGGRECGKCRVSTKRLNLNKFCKRDYAIMAKVIGRDTSSEAVSRE 572
            ...:          |:  ..|....|..|..|    .:::.|   ::...:.:..:|.::....:
  Fly   572 LNVEGSTCSECAPGYFDLSAENAEGCTSCWCS----GVSQTC---HSAKLQTLAFETLNDWKITD 629

  Fly   573 VQRRAMDPDVADYEMDQVQPGSARSPITGVYEFQAADYPNPNPNPRGSEMERFDLQIQA-----V 632
            :||........|.|.:::...:....:..:|...:..|       .|:.:..:..::|.     |
  Fly   630 IQRVKPISIPVDAETNRLIFANELDEVEAIYWQASLGY-------LGNRLTSYGSRLQLVLSWDV 687

  Fly   633 FKRSRPGESSGAGNVYGMPNTTLK 656
            .:..|.|:.:...||..:....||
  Fly   688 IRGDRSGKPTTGPNVILVGKNGLK 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532 70/256 (27%)
EGF_Lam 312..357 CDD:238012 20/45 (44%)
EGF_Lam 369..426 CDD:238012 20/56 (36%)
EGF_Lam 431..479 CDD:238012 17/47 (36%)
NTR_netrin-1_like 545..723 CDD:239634 17/117 (15%)
wbNP_723870.1 Laminin_N 164..396 CDD:278484 73/280 (26%)
EGF_Lam 401..450 CDD:238012 20/53 (38%)
TNFRSF <407..507 CDD:304602 37/113 (33%)
EGF_Lam 505..552 CDD:238012 17/47 (36%)
Laminin_EGF 550..597 CDD:278482 10/67 (15%)
Laminin_B 660..798 CDD:278481 11/59 (19%)
EGF_Lam 851..900 CDD:238012
Laminin_EGF <943..971 CDD:278482
VSP 953..1414 CDD:146106
Laminin_EGF 974..1018 CDD:278482
EGF_Lam 1017..1065 CDD:238012
Laminin_EGF 1065..>1105 CDD:278482
EGF_Lam 1150..1197 CDD:238012
Laminin_EGF 1199..1247 CDD:278482
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:278482
Laminin_EGF 1340..1392 CDD:278482
Laminin_B 1486..1611 CDD:278481
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:278482
EGF_Lam 1772..1819 CDD:238012
CrfC <1933..2267 CDD:223771
Laminin_II 2277..2400 CDD:283628
LamG 2399..>2492 CDD:304605
Laminin_G_2 2616..2755 CDD:280389
Laminin_G_2 2804..2944 CDD:280389
Laminin_G_2 3038..3169 CDD:280389
LamG 3192..3347 CDD:238058
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445154
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10574
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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