DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetA and LAMB1

DIOPT Version :10

Sequence 1:NP_511154.3 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_054214165.1 Gene:LAMB1 / 3912 HGNCID:6486 Length:1810 Species:Homo sapiens


Alignment Length:734 Identity:188/734 - (25%)
Similarity:287/734 - (39%) Gaps:197/734 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAHEPR--------ACIPD----FVNAAYDAPVVASSTCGSSGAQRYC--EYQDHERSCHTCDMT 93
            :|.||.        :|.|.    .:..|....|  :||||....:.||  .:...::.|..|:..
Human    44 RAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSV--TSTCGLHKPEPYCIVSHLQEDKKCFICNSQ 106

  Fly    94 DPLRSF--PARSLTDLNNSNNVTC---------WRSEPVTGSGDNVTLTLSLGKKFELTYVILQL 147
            ||....  |...|.:    |.||.         |:||   ...:|||:.|.|..:|..|::|:..
Human   107 DPYHETLNPDSHLIE----NVVTTFAPNRLKIWWQSE---NGVENVTIQLDLEAEFHFTHLIMTF 164

  Fly   148 CPHAPRPDSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTGRHNE-----HEARCSDVTRP 207
              ...||.:|:|.:|:|.|.:|..:::|:..|...|  |. .|||...:     .::|.||:...
Human   165 --KTFRPAAMLIERSSDFGKTWGVYRYFAYDCEASF--PG-ISTGPMKKVDDIICDSRYSDIEPS 224

  Fly   208 LVSRIAFSTLEGRPSSRDLDS-SPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGK 271
            ....:.|..|:  |:.:..|. ||.:|:.:..|::|:.|.:|.                      
Human   225 TEGEVIFRALD--PAFKIEDPYSPRIQNLLKITNLRIKFVKLH---------------------- 265

  Fly   272 YSVPLANGPAGNNIEANLGGDVATSGSGL----HYAISDFSVGGRCKCNGHASKC------STDA 326
                            .||.::..|...:    :||:.|..|.|.|.|.||||:|      :.:.
Human   266 ----------------TLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEV 314

  Fly   327 SGQL--NCECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLSQ 389
            .|.:  :|.|.|||.|.:||.|..|:.|.||..|..:.:|.||:||||:|:..|.|:|.::..:.
Human   315 EGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSISCHFDMAVYLATG 379

  Fly   390 GVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGK-ICNS------- 446
            .||||||.:|:|:|.||||.|||..:|:...:.:.....|:.|.|.|.||..: ||:|       
Human   380 NVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNFCERCTCDPAGSQNEGICDSYTDFSTG 444

  Fly   447 -TSGQCPCKDGVTGLTCNRCARGYQQSRSH----IAPCIKQPPRMI---NMLDTQN--------- 494
             .:|||.||..|.|..|:.|..|:....|.    ...|...|...|   |..|::.         
Human   445 LIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPGGNPCDSETGHCYCKRLV 509

  Fly   495 TAPEPDE--PESSPGSGGDRNGA------AGMAAQSQYYRTEG---------GRECGKCRVSTKR 542
            |....|:  ||.. |...|.:|.      .|.|..:..:...|         ||:|.:....   
Human   510 TGQHCDQCLPEHW-GLSNDLDGCRPCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPG--- 570

  Fly   543 LNLNKFCKRDYAIMAKVIGRDTSSEAVSREVQRRAMDPDVADYEMDQVQ--------PGSARSPI 599
               ..|...|:.:.               |.:...:.|.|:..|...:|        .|..|.|.
Human   571 ---YYFATLDHYLY---------------EAEEANLGPGVSIVERQYIQDRIPSWTGAGFVRVPE 617

  Fly   600 TGVYEFQAADYPNPNPNPRGSEME-----RFDLQI-----QAVFKRSRPGE---SSGAGNVYGMP 651
            ....||...:.|        ..||     |::.|:     :||....|||.   ||..||.  :|
Human   618 GAYLEFFIDNIP--------YSMEYDILIRYEPQLPDHWEKAVITVQRPGRIPTSSRCGNT--IP 672

  Fly   652 N-----TTLKRGPMTWIIP 665
            :     .:|..|....::|
Human   673 DDDNQVVSLSPGSRYVVLP 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_511154.3 LamNT 44..280 CDD:214532 62/266 (23%)
EGF_Lam 312..357 CDD:238012 21/52 (40%)
EGF_Lam 369..426 CDD:238012 25/56 (45%)
EGF_Lam 431..479 CDD:238012 19/60 (32%)
NTR_netrin-1_like 545..723 CDD:239634 30/147 (20%)
LAMB1XP_054214165.1 Laminin_N 59..293 CDD:459653 66/287 (23%)
EGF_Lam 295..347 CDD:238012 21/51 (41%)
EGF_Lam 359..411 CDD:238012 25/51 (49%)
Laminin_EGF 422..479 CDD:395007 19/56 (34%)
Laminin_EGF 482..536 CDD:395007 12/54 (22%)
EGF_Lam 533..>572 CDD:238012 6/44 (14%)
EGF_Lam 797..842 CDD:214543
Laminin_EGF 845..893 CDD:395007
Laminin_EGF 891..938 CDD:395007
Laminin_EGF 941..997 CDD:395007
Laminin_EGF 1000..1044 CDD:395007
Laminin_EGF 1052..1106 CDD:395007
Laminin_EGF 1108..1156 CDD:395007
Laminin_EGF 1156..>1195 CDD:395007
PTZ00121 <1248..1802 CDD:173412
cc_LAMB1_C 1738..1810 CDD:411971
Blue background indicates that the domain is not in the aligned region.

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