DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetA and LanB2

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001287009.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster


Alignment Length:763 Identity:251/763 - (32%)
Similarity:329/763 - (43%) Gaps:190/763 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PEDPCYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYC---EYQDHERSCHTCDMTDPLR 97
            |...||:....|:.|:|:|:||||...:.:::|||......:|   ..|:| ::|..|...|...
  Fly    53 PALECYDPYGRPQKCLPEFINAAYQLQIESTNTCGEQNDNHFCIQTMNQNH-KNCEFCKYNDHNP 116

  Fly    98 SFPARSLTDLNNSNNVTCWRSEPV---TGSGDNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVI 159
            ||    ||||::..:.|.|:||.:   ....:.|.|||.|||.:::|||  ::...:|||:|..|
  Fly   117 SF----LTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYV--RILFRSPRPESFTI 175

  Fly   160 YKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTGRHNEHEARC------SDVTRPLVSRIAFSTLE 218
            ||.|.....|.|:||:|:.||..:..|..::. |..|.||..      ||::......|||||||
  Fly   176 YKRTSESGPWIPYQFYSATCRDTYSLPDSRAI-RKGEGEAHALCTSEYSDISPLRDGEIAFSTLE 239

  Fly   219 GRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLANGPAGN 283
            ||||..:.:.|..||:||||||||:...||                                  |
  Fly   240 GRPSGINFERSGELQEWVTATDIRITLDRL----------------------------------N 270

  Fly   284 NIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKC--STDASGQ--LNCECSHNTAGRDCE 344
            .....|.||.....| ..|||||.:||.|||||||||||  ||...|:  |.|||.|||.|.||:
  Fly   271 TFGDELFGDSQVLKS-YFYAISDIAVGARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCD 334

  Fly   345 RCKPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCH 409
            ||.|.:.|..|.|:|:.|.||||.||||..|.:|.|:..:|  ::...||.|.:||.:..|.||.
  Fly   335 RCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANLF--NRTGHGGHCLDCRENRDGPNCE 397

  Fly   410 QCKEGFY-RDATKPLTHRKVCKACDCHPIGSSGKICNSTSGQCPCKDGVTGLTCNRCARGYQQSR 473
            :|||.|| ||       ...|..|.|.|:||....||| .|:|.||.||||..|:||...|.|..
  Fly   398 RCKENFYMRD-------DGYCVNCACDPVGSRSLQCNS-HGKCQCKPGVTGDKCDRCDNNYYQFG 454

  Fly   474 SH-IAPCIKQPPRMINMLDT----QNTAPEPDEP----------------ESSPGSGG-DRNGAA 516
            .| ...|         ..|:    ||| |..|..                |..||... |:|...
  Fly   455 PHGCQQC---------GCDSGGSHQNT-PACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRF 509

  Fly   517 GMAAQSQYYRTEGGREC----GKCRVSTKRLNLNKFCKR-------------DYAIMAKVIGRDT 564
            |......|..|.   ||    |...||... |.|||.:|             .|...::.||...
  Fly   510 GCTPCFCYGHTS---ECMTAPGYSIVSVTS-NFNKFKERWTAADLNQREVDIKYNQYSRSIGTTA 570

  Fly   565 -SSEAVSREVQRRAMDPDVADYEMD---------QVQ-----------PGSARS----------P 598
             .:|.|..:...|.:....|.|..|         ||.           .||..|          |
  Fly   571 QGNEHVYFQAPDRFLGDQRASYNRDLKFKLQLVGQVANTGVSDVILEGAGSRISLPIFAQGNGIP 635

  Fly   599 ITGVYEF-----QAADYP-NPNPNPRG-----SEMERFDLQIQAVFKRSRPGESSGAGNVYGMPN 652
            ..||.|:     :..||. .|:.:.||     |.:..  ::|:|.:  |..||:.    :..:..
  Fly   636 DQGVKEYTFRLHEHHDYQWQPSQSARGFLSILSNLTA--IKIRATY--SVQGEAI----LDDVEL 692

  Fly   653 TTLKRG----PMTWIIPTKDLECRCPRIRVNRSYLILGRDSEA-PPGY 695
            .|..||    |.|||     .:|.||     ..|  ||:..|: .|||
  Fly   693 QTAHRGAAGHPATWI-----EQCTCP-----EGY--LGQFCESCAPGY 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532 83/247 (34%)
EGF_Lam 312..357 CDD:238012 29/48 (60%)
EGF_Lam 369..426 CDD:238012 23/57 (40%)
EGF_Lam 431..479 CDD:238012 22/48 (46%)
NTR_netrin-1_like 545..723 CDD:239634 50/211 (24%)
LanB2NP_001287009.1 LamNT 61..296 CDD:214532 93/277 (34%)
EGF_Lam 298..347 CDD:238012 29/48 (60%)
Laminin_EGF 359..414 CDD:278482 24/63 (38%)
EGF_Lam 414..458 CDD:214543 22/44 (50%)
Laminin_EGF 461..511 CDD:278482 12/59 (20%)
LamB 572..697 CDD:214597 27/132 (20%)
TNFRSF <721..848 CDD:304602 4/8 (50%)
CRD2 724..771 CDD:276900 3/5 (60%)
EGF_Lam 743..791 CDD:238012
Laminin_EGF 847..897 CDD:278482
Laminin_EGF 902..953 CDD:278482
Laminin_EGF 956..1004 CDD:278482
Laminin_EGF 1004..1050 CDD:278482
V_Alix_like 1122..1443 CDD:187408
Tar 1139..1521 CDD:223910
BAR 1308..1469 CDD:299863
vATP-synt_E 1474..>1629 CDD:304907
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445143
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10574
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.