DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetA and LAMA2

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_016866340.1 Gene:LAMA2 / 3908 HGNCID:6482 Length:3212 Species:Homo sapiens


Alignment Length:683 Identity:178/683 - (26%)
Similarity:286/683 - (41%) Gaps:141/683 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 AHEPRA--CIPDFVNAAYDAPVVASSTCGSSGAQRYCEYQDH-------ERSCHTCDM--TDPLR 97
            |||.||  ..|..:|.|.:|.:..::|||..|.:.||:..:|       ...|..|:.  ::|.:
Human    33 AHELRARGLFPAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPNQ 97

  Fly    98 SFPARSLTDLNNSNNVTCWRSEPVTGSGD--NVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIY 160
            ..|..:..|..|    |.|:|..:....:  .||:||.|.:.|::.|||:: ..::|||.:.::.
Human    98 RHPITNAIDGKN----TWWQSPSIKNGIEYHYVTITLDLQQVFQIAYVIVK-AANSPRPGNWILE 157

  Fly   161 KSTDHGLSWQPFQFFS---SQCRRLFG-RPARQSTGRHNEHEARCSDV---TRPLVS-RIAFSTL 217
            :|.| .:.::|:|:.:   ::|..|:. .|.........:.|..|:..   ..||.: .|..|.:
Human   158 RSLD-DVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEIHISLI 221

  Fly   218 EGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLANGPAG 282
            .||||:.  |.||.|.::.:|..||:.|.|::        :|.|    ||....:..|....|  
Human   222 NGRPSAD--DPSPELLEFTSARYIRLRFQRIR--------TLNA----DLMMFAHKDPREIDP-- 270

  Fly   283 NNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTD-ASGQLNCECSHNTAGRDCERC 346
                      :.|  ...:|::.|.||||.|.|.|||..|..| |:.:..|||.|||.|..|::|
Human   271 ----------IVT--RRYYYSVKDISVGGMCICYGHARACPLDPATNKSRCECEHNTCGDSCDQC 323

  Fly   347 KPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLS-------QGVSGGVCQNCRHSTT 404
            .|....:||...|.....||:.|||:..|.:|.::..:.|.:       :.:.||||.||..:|.
Human   324 CPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTA 388

  Fly   405 GRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGKIC---------NSTSGQCPCKDGVTGL 460
            |.||..|.:||:|.......:.:.|:.|.|.||||..::|         ....|.|.||.|..|:
Human   389 GINCETCTDGFFRPKGVSPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGV 453

  Fly   461 TCNRCARGY----------------QQSRSHIAPCIKQPPRMINMLDTQNTAPEPDEPESSPGSG 509
            :|:||||||                :.......|||.:          :|.            .|
Human   454 SCDRCARGYTGYPDCKACNCSGLGSKNEDPCFGPCICK----------ENV------------EG 496

  Fly   510 GDRNGAAGMAAQSQYY--RTEGGRECGKCRVSTKRLNLNKFCKRDYAIMAKVIGRDTSSEAVSRE 572
            ||.:     ..:|.::  :.:..:.|.:|..|    .::..|:..|....|:  :|.|...::..
Human   497 GDCS-----RCKSGFFNLQEDNWKGCDECFCS----GVSNRCQSSYWTYGKI--QDMSGWYLTDL 550

  Fly   573 VQRRAMDPDVADYEMDQ---VQPGSARSPITGVYEFQA-ADY-PNPNPNPRGS---------EME 623
            ..|..:.|...|.:..|   :....||..:...|.:.| |.| .|..|...|.         |.|
Human   551 PGRIRVAPQQDDLDSPQQISISNAEARQALPHSYYWSAPAPYLGNKLPAVGGQLTFTISYDLEEE 615

  Fly   624 RFD----LQIQAVFKRSRPGESSGAGNVYGMPN 652
            ..|    ||:..:.:.:....|:....||..|:
Human   616 EEDTERVLQLMIILEGNDLSISTAQDEVYLHPS 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532 68/256 (27%)
EGF_Lam 312..357 CDD:238012 20/45 (44%)
EGF_Lam 369..426 CDD:238012 20/63 (32%)
EGF_Lam 431..479 CDD:238012 20/72 (28%)
NTR_netrin-1_like 545..723 CDD:239634 27/126 (21%)
LAMA2XP_016866340.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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