DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetA and ntn1b

DIOPT Version :10

Sequence 1:NP_511154.3 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_571073.1 Gene:ntn1b / 30192 ZFINID:ZDB-GENE-990415-168 Length:602 Species:Danio rerio


Alignment Length:712 Identity:306/712 - (42%)
Similarity:401/712 - (56%) Gaps:163/712 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 MFSQQAPPEDPCYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYCEY----QDHERSCHT 89
            ||:.|:.|.||||::...||.|||||||:|:...|..||||||. ..|.|..    ::..|.|:.
Zfish    29 MFAAQSSPPDPCYDENGNPRRCIPDFVNSAFGKDVRVSSTCGSP-PSRCCRVTEKGEERSRDCNI 92

  Fly    90 CDMTDPLRSFPARSLTDLNNSNNVTCWRSEPVTGSGDNVTLTLSLGKKFELTYVILQLCPHAPRP 154
            ||.|||.::.|...||||||.:|:|||:||.......|||||||||||||:|||.||.|  :|||
Zfish    93 CDATDPKKTHPPAYLTDLNNPHNLTCWQSENYVQYPQNVTLTLSLGKKFEVTYVSLQFC--SPRP 155

  Fly   155 DSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTGRHNEHEARCSDV---TRPLV-SRIAFS 215
            :||.|:||.|:|.:|.||||:|:||::::.:|::.:..:.||.||.|:|.   .:||. ..||||
Zfish   156 ESMAIFKSMDYGKTWVPFQFYSTQCKKMYNKPSKAAITKQNEQEAICTDSHTDMQPLTGGLIAFS 220

  Fly   216 TLEGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLANGP 280
            ||:||||:.|.|:|||||||||||||:|.|:||.      ....|....::||...|        
Zfish   221 TLDGRPSAHDFDNSPVLQDWVTATDIKVTFNRLH------TFGDENEDDSELARDSY-------- 271

  Fly   281 AGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCER 345
                                .||:||..||||||||||||||..|..|.|.|||.|||||.:|:|
Zfish   272 --------------------FYAVSDLQVGGRCKCNGHASKCVKDREGNLVCECKHNTAGPECDR 316

  Fly   346 CKPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQ 410
            |||||:||||.||||:|||||..|:||.|||:||||||:::||...|||||.||||:|.||:||.
Zfish   317 CKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHY 381

  Fly   411 CKEGFYRDATKPLTHRKVCKACDCHPIGSSGKICNSTSGQCPCKDGVTGLTCNRCARGYQQSRSH 475
            ||||:|||.:|.::||:.||||||||:|::||.||.|:|||||||||||:||||||:|||||||.
Zfish   382 CKEGYYRDMSKAISHRRACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSP 446

  Fly   476 IAPCIKQPPRMINMLDTQNTAPEPDEPESSPGSGGDRNGAAGMAAQSQYYRTEGGREC------- 533
            ||||||.|            ...|....|||                     :|..:|       
Zfish   447 IAPCIKIP------------VAAPTSSYSSP---------------------DGPTDCDSHCKAP 478

  Fly   534 -GKCRVSTKRLNLNKFCKRDYAIMAKVIGRDTSSEAVSREVQRRAMDPDVADYEMDQVQPGSARS 597
             ||.:|:.|     |:||:|:|:...|:..|                                  
Zfish   479 KGKMKVTMK-----KYCKKDFAVQVHVLKGD---------------------------------- 504

  Fly   598 PITGVYEFQAADYPNPNPNPRGSEMERFDLQIQAVFKRSRPGESSGAGNVYGMPNTTLKRGPMTW 662
                                :..|..:|.:.|.:|:|:.               ...::||....
Zfish   505 --------------------KAGEWWKFTINIISVYKQG---------------GHRIRRGDQLL 534

  Fly   663 IIPTKDLECRCPRIRVNRSYLILGRDSEAPP-GYLGI--GPHSIVIEWKEDWYRRMKRFQRR 721
            .:..||:.|:||:|:..|.||::|.|.|... |..|:  ...|::|.||:.|.||:::||:|
Zfish   535 WVRAKDVACKCPKIKPGRKYLLMGSDEEEDSRGQSGVVADRGSLLIPWKDLWARRLRKFQQR 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_511154.3 LamNT 44..280 CDD:214532 118/243 (49%)
EGF_Lam 312..357 CDD:238012 33/44 (75%)
EGF_Lam 369..426 CDD:238012 36/56 (64%)
EGF_Lam 431..479 CDD:238012 38/47 (81%)
NTR_netrin-1_like 545..723 CDD:239634 38/180 (21%)
ntn1bNP_571073.1 LamNT 45..282 CDD:214532 123/273 (45%)
EGF_Lam 283..328 CDD:238012 33/44 (75%)
Laminin_EGF 340..389 CDD:395007 33/48 (69%)
EGF_Lam 402..450 CDD:238012 38/47 (81%)
NTR_netrin-1_like 486..602 CDD:239634 39/185 (21%)

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