DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetA and Ntng1

DIOPT Version :10

Sequence 1:NP_511154.3 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001099935.1 Gene:Ntng1 / 295382 RGDID:1563465 Length:539 Species:Rattus norvegicus


Alignment Length:474 Identity:137/474 - (28%)
Similarity:213/474 - (44%) Gaps:109/474 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KAHEPRACIPD------FVNAAYDAPVVASSTCGSSGAQRYCEYQDHERSCHTCDMTDPLRSFPA 101
            |..:..||.|:      ::....|.|.:   |||.. .:.:|...:.....:.||.:.|..:.|.
  Rat    43 KVWDYMACQPESTDMTKYLKVKLDPPDI---TCGDP-PESFCAMGNPYMCNNECDASTPELAHPP 103

  Fly   102 RSLTDLNNSNNVTCWRS-------EPVTGSGDNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVI 159
            ..:.|....:..|.|:|       :|:     .|.:|||..|..|||..|: :...:.|||.|::
  Rat   104 ELMFDFEGRHPSTFWQSATWKEYPKPL-----QVNITLSWSKTIELTDNIV-ITFESGRPDQMIL 162

  Fly   160 YKSTDHGLSWQPFQFFSSQCRRLFGRPAR--QSTGRHNEHEARCSD------------VTRPLVS 210
            .||.|:|.:|||:|::::.|...|....:  :...:|...|..|::            :...:..
  Rat   163 EKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEYSTGYSTNSKIIHFEIKD 227

  Fly   211 RIAF---------STLEGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATD 266
            |.||         ::|.|:     ||::..|:|:.|.||:|:   ||.||               
  Rat   228 RFAFFAGPRLRNMASLYGQ-----LDTTKKLRDFFTVTDLRI---RLLRP--------------- 269

  Fly   267 LASGKYSVPLANGPAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTDASGQLN 331
             |.|:..|.          |.:|        :...|||||..|.||||||.||:.|..|.| :|.
  Rat   270 -AVGEIFVD----------ELHL--------ARYFYAISDIKVRGRCKCNLHATMCVYDNS-KLT 314

  Fly   332 CECSHNTAGRDCERCKPFHFDRPWARAT-----AKEANEC-------KECNCNKHARQCRFNMEI 384
            |||.|||.|.||.:||..:..|||:..:     ...||.|       ..|.|..|:.:|.: :::
  Rat   315 CECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANTCIPSISSIGNCECFGHSNRCSY-IDL 378

  Fly   385 FRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGKICNSTSG 449
                  ::..:|.:|:|:|.|::|..|:.|::|:|:..|....||..|.|:|:||....||. ||
  Rat   379 ------LNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDRCNG-SG 436

  Fly   450 QCPCKDGVTGLTCNRCARG 468
            .|.||.|.||..|:.|..|
  Rat   437 FCECKTGTTGPKCDECLPG 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_511154.3 LamNT 44..280 CDD:214532 64/271 (24%)
EGF_Lam 312..357 CDD:238012 25/44 (57%)
EGF_Lam 369..426 CDD:238012 15/56 (27%)
EGF_Lam 431..479 CDD:238012 18/38 (47%)
NTR_netrin-1_like 545..723 CDD:239634
Ntng1NP_001099935.1 Laminin_N 50..295 CDD:459653 71/296 (24%)
EGF_Lam 296..342 CDD:238012 25/46 (54%)
EGF_Lam 364..412 CDD:238012 14/54 (26%)
EGF_Lam 420..467 CDD:214543 18/37 (49%)
EGF_CA <474..498 CDD:238011
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.