DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetA and lamc1

DIOPT Version :10

Sequence 1:NP_511154.3 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_775384.1 Gene:lamc1 / 286832 ZFINID:ZDB-GENE-021226-3 Length:1593 Species:Danio rerio


Alignment Length:790 Identity:240/790 - (30%)
Similarity:341/790 - (43%) Gaps:208/790 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DPCYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYC---EYQDHERSCHTCDMTDPLRSF 99
            |.|.::...|:.|:|:|||||::|.|||::||||. .:.:|   ......:|||.|:..||....
Zfish    22 DECIDEDDRPQRCMPEFVNAAFNATVVATNTCGSP-PEEFCVQTGVTGVTKSCHICNAADPRLHH 85

  Fly   100 PARSLTDLNNSNNVTCWRSEPVTGS---GDNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIYK 161
            .|..|||.|.....|.|:|:.:...   .:::.|||.|||.|::|||.|:.  |..||:|..|||
Zfish    86 GAVYLTDYNQPVQPTWWQSQTMLAGIQYPNSINLTLHLGKSFDITYVRLKF--HTSRPESFAIYK 148

  Fly   162 STDHGLSWQPFQFFSSQCRRLFGRPARQ--STGRHNEHEARC----SDVTRPLVSRIAFSTLEGR 220
            .:.....|.|:|::|..|.:.:.:..|.  .|| .:|.:|.|    ||::......:||||||||
Zfish   149 RSSEDGPWTPYQYYSGSCEKTYSKNNRGFIRTG-EDEQQALCTDEFSDISPLYGGNVAFSTLEGR 212

  Fly   221 PSSRDLDSSPVLQDWVTATDIRVVFHRLQR------PDPQALLSLEAGGATDLASGKYSVPLANG 279
            ||:.:.|:|||||||||||||||..:||..      .||:.|.|                     
Zfish   213 PSAYNFDNSPVLQDWVTATDIRVTLNRLNTFGDEVFNDPKVLKS--------------------- 256

  Fly   280 PAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCE 344
                                .:||||||:||||||||||||:|..:...:|.|.|.|||.|.||.
Zfish   257 --------------------YYYAISDFAVGGRCKCNGHASECVKNEYSKLVCNCKHNTEGADCN 301

  Fly   345 RCKPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCH 409
            .||||:.||||.||||:..|||..||||..:.:|.|:.|::|.:.  .||.|:||..:|.|..|.
Zfish   302 VCKPFYNDRPWRRATAENPNECLPCNCNGKSAECYFDPELYRATG--HGGHCRNCADNTDGPKCE 364

  Fly   410 QCKEGFYRDATKPLTHRKVCKACDCHPIGSSGKICNSTSGQCPCKDGVTGLTCNRCARGYQQ-SR 473
            :|...:||:|:     .:.|.:|.|:|:||....|::| |:|.||.||.|..|:||..||.. |.
Zfish   365 RCLANYYREAS-----GQRCLSCGCNPVGSLSTQCDNT-GRCSCKPGVMGDKCDRCQPGYHSLSE 423

  Fly   474 SHIAPCIKQPPRMINMLDTQNTAPEPDEPESSPGSGGDRNGAAGMAAQSQYYRTEGGRECGKCRV 538
            :...||...|.......|.|                         ..:.|......|..|.:|::
Zfish   424 AGCRPCSCNPAGSTQECDVQ-------------------------TGRCQCKENVDGFNCDRCKL 463

  Fly   539 STKRLNLNK-------FCKRDYAIMAKVIG---------------------RDTSSEAV-----S 570
            ....|:...       ||.:...:.....|                     ||.||..|     |
Zfish   464 GYFNLDPQNPQGCTPCFCFQHSTVCESADGYSVHKITSTFDRDDEGWKGKQRDDSSVPVQWSPSS 528

  Fly   571 REVQRRAMD--------PD------VADYEMD-----QVQPGSAR----------------SPI- 599
            .|:...:.|        ||      :..|..:     ::|...||                .|: 
Zfish   529 GEISLISEDYFPIYFVAPDKFLHNQLLSYGQNLTLNFRIQRHDARLSAEDVVLEGSGLRVAVPLI 593

  Fly   600 ----------TGVYEFQ---AADYPNPNPNPRGSEMERFDLQIQAVFKRSRPGESSGAGNVYGMP 651
                      |..:.|:   ..||| ..|..:.::.::....:.::..|......| ||.:..:.
Zfish   594 AQGNSYPGEETQTFVFRLHDTTDYP-WRPTIKHADFQKLLYNLTSIMIRGTYSAQS-AGYLDNVS 656

  Fly   652 NTTLKRGPMTWIIPTKDLE-CRCPRIRVNRSYLILGRDSEAPPGYLGIGPHSIVIEWKEDWYRRM 715
            ..|.:|||.|   |.:.:| |.||:                  |||  |.|   .|..:..:||.
Zfish   657 LVTARRGPGT---PARWVEKCTCPQ------------------GYL--GQH---CEQCDQGFRRS 695

  Fly   716 KRFQRRARTC 725
            :...||..||
Zfish   696 RPELRRFSTC 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_511154.3 LamNT 44..280 CDD:214532 94/253 (37%)
EGF_Lam 312..357 CDD:238012 27/44 (61%)
EGF_Lam 369..426 CDD:238012 20/56 (36%)
EGF_Lam 431..479 CDD:238012 20/48 (42%)
NTR_netrin-1_like 545..723 CDD:239634 48/260 (18%)
lamc1NP_775384.1 LamNT 30..268 CDD:214532 101/282 (36%)
EGF_Lam 269..314 CDD:238012 27/44 (61%)
Laminin_EGF 326..379 CDD:395007 20/59 (34%)
Laminin_EGF 382..429 CDD:395007 20/47 (43%)
Laminin_EGF 429..476 CDD:395007 9/71 (13%)
Laminin_B 542..672 CDD:459652 23/134 (17%)
EGF_Lam 707..749 CDD:238012
Laminin_EGF 812..856 CDD:395007
EGF_Lam 867..917 CDD:238012
EGF_Lam 919..964 CDD:214543
Laminin_EGF 967..1013 CDD:395007
Domain II and I. /evidence=ECO:0000250 1014..1593
235kDa-fam <1028..>1577 CDD:130673
Blue background indicates that the domain is not in the aligned region.

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