DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetA and Ush2a

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_067383.3 Gene:Ush2a / 22283 MGIID:1341292 Length:5193 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532
EGF_Lam 312..357 CDD:238012
EGF_Lam 369..426 CDD:238012
EGF_Lam 431..479 CDD:238012
NTR_netrin-1_like 545..723 CDD:239634
Ush2aNP_067383.3 LamGL 145..280 CDD:214722
Laminin_N 313..513 CDD:295486
EGF_Lam 514..562 CDD:238012
EGF_Lam 571..636 CDD:238012
Laminin_EGF 638..688 CDD:278482
Laminin_EGF 691..741 CDD:278482
EGF_Lam 743..788 CDD:238012
EGF_Lam 792..832 CDD:214543
Laminin_EGF 844..894 CDD:278482
EGF_Lam 896..945 CDD:238012
EGF_Lam 947..997 CDD:238012
EGF_Lam 998..>1035 CDD:238012
fn3 1055..1128 CDD:278470
FN3 1153..1235 CDD:238020
FN3 1239..1351 CDD:238020
FN3 1362..1445 CDD:214495
Laminin_G_2 1539..1669 CDD:280389
LamG 1707..1857 CDD:238058
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1931..1955
FN3 1947..2042 CDD:238020
FN3 2134..2230 CDD:238020
FN3 2232..2304 CDD:238020
FN3 2320..2419 CDD:238020
FN3 2423..2516 CDD:238020
FN3 2524..2610 CDD:238020
FN3 2612..2710 CDD:238020
FN3 2715..2807 CDD:238020
FN3 2809..2911 CDD:238020
FN3 2916..2993 CDD:238020
FN3 <3441..3486 CDD:238020
FN3 3582..3668 CDD:238020
FN3 3672..3753 CDD:238020
FN3 3769..3854 CDD:238020
FN3 3867..3952 CDD:238020
FN3 3956..4053 CDD:238020
FN3 4153..4239 CDD:238020
FN3 4260..4343 CDD:238020
FN3 4348..4431 CDD:238020
FN3 4435..4519 CDD:238020
FN3 4521..4619 CDD:238020
FN3 4645..4722 CDD:238020
FN3 4724..4800 CDD:238020
FN3 4817..4918 CDD:238020
PDZ-binding 5191..5193
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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