DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NetA and Ntn3

DIOPT Version :10

Sequence 1:NP_511154.3 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_035077.1 Gene:Ntn3 / 18209 MGIID:1341188 Length:580 Species:Mus musculus


Alignment Length:702 Identity:287/702 - (40%)
Similarity:357/702 - (50%) Gaps:172/702 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DPCYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYCEYQDHERSCHTCDMTDPLRSFPAR 102
            ||||::|.|||:|||..||||....|:||||||.| |.|            .||.:||.|:..|.
Mouse    28 DPCYDEAREPRSCIPGLVNAALGREVLASSTCGRS-ANR------------VCDSSDPQRAHSAD 79

  Fly   103 SLTDLNNSNNVTCWRSEPVTGSGDNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIYKSTDHGL 167
            .||....:.:..||||:.:..:..|||||:.|||.|||.:|.|:.| .|| |.|:.:.||.|||.
Mouse    80 LLTSAPGTASPLCWRSDLLQQAPFNVTLTVPLGKAFELVFVSLRFC-SAP-PTSVALLKSQDHGR 142

  Fly   168 SWQPFQFFSSQCRRLFGR---PARQSTGRHNEHEARCSDVTRPLV---SRIAFSTLEGRPSSRDL 226
            ||.|..||||.|...:||   ||...:|  ...||.|....:...   ..:|||..:|.|...||
Mouse   143 SWVPLGFFSSSCTLDYGRLPAPADGPSG--PGPEALCFPAPQAQPDGGGLLAFSVQDGSPQGLDL 205

  Fly   227 DSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLANGPAGNNIEANLGG 291
            |:||||||||||||||:|   |.||..|.          |...|..:||.:              
Mouse   206 DNSPVLQDWVTATDIRIV---LTRPAIQG----------DTRDGGVTVPYS-------------- 243

  Fly   292 DVATSGSGLHYAISDFSVGGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRPWA 356
                      |:.::..||||||||||||:|..|..|.|.|:|.|.|.|.||.|||||:.||||.
Mouse   244 ----------YSATELQVGGRCKCNGHASRCLLDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQ 298

  Fly   357 RATAKEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATK 421
            |||.:||:.|..|:||.|||:||||||::|||...|||||.||||:|.||:||.|:||||||..:
Mouse   299 RATGQEAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGR 363

  Fly   422 PLTHRKVCKACDCHPIGSSGKICNSTSGQCPCKDGVTGLTCNRCARGYQQSRSHIAPCIKQPPRM 486
            .|:.|:.|:||||||:|::||.||.|:||||||||||||||||||.|:|||||.:|||:|.|   
Mouse   364 VLSDRRACRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPGFQQSRSPVAPCVKTP--- 425

  Fly   487 INMLDTQNTAPEPDEPESSPGSGGDRNGAAGMAAQSQYYRTEGGREC-GKCRVS--TKRLNLNKF 548
                     .|.|.| ||||....|                     | ..||.:  :.|::|.||
Mouse   426 ---------VPGPTE-ESSPVEPQD---------------------CESHCRPARGSYRISLKKF 459

  Fly   549 CKRDYAIMAKVIGRDTSSEAVSREVQRRAMDPDVADYEMDQVQPGSARSPITGVYEFQAADYPNP 613
            |::|||:...|..|                              |.||...|             
Mouse   460 CRKDYAVQVAVGAR------------------------------GEARGSWT------------- 481

  Fly   614 NPNPRGSEMERFDLQIQAVFKRSRPGESSGAGNVYGMPNTTLKRGPMTWIIPTKDLECRCPRIRV 678
                      ||.:.:.|||   |.||...            :||.....:||.|..|.|||:..
Mouse   482 ----------RFPVAVLAVF---RSGEERA------------RRGSSALWVPTLDAACGCPRLLP 521

  Fly   679 NRSYLILGRDSEAPPGY-------LGIGPHSIVIEWKEDWYRRMKRFQRRAR 723
            .|.||:||....|..|.       |.....|:|:.|::.|.||::|.|||.|
Mouse   522 GRRYLLLGGGPGAAAGSTAGRGQGLSAARGSLVLPWRDAWTRRLRRLQRRER 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_511154.3 LamNT 44..280 CDD:214532 103/241 (43%)
EGF_Lam 312..357 CDD:238012 29/44 (66%)
EGF_Lam 369..426 CDD:238012 37/56 (66%)
EGF_Lam 431..479 CDD:238012 37/47 (79%)
NTR_netrin-1_like 545..723 CDD:239634 48/184 (26%)
Ntn3NP_035077.1 Laminin_N 34..253 CDD:470680 105/272 (39%)
EGF_Lam 254..299 CDD:238012 29/44 (66%)
Laminin_EGF 311..362 CDD:395007 36/50 (72%)
EGF_Lam 373..422 CDD:238012 38/48 (79%)
NTR_netrin-1_like 456..562 CDD:239634 41/173 (24%)
Cell attachment site, atypical. /evidence=ECO:0000255 500..502 1/1 (100%)

Return to query results.
Submit another query.