DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetA and lam-2

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_509204.3 Gene:lam-2 / 180980 WormBaseID:WBGene00016913 Length:1633 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532
EGF_Lam 312..357 CDD:238012
EGF_Lam 369..426 CDD:238012
EGF_Lam 431..479 CDD:238012
NTR_netrin-1_like 545..723 CDD:239634
lam-2NP_509204.3 LamNT 45..285 CDD:214532
EGF_Lam 286..337 CDD:238012
Laminin_EGF 347..405 CDD:278482
EGF_Lam 403..447 CDD:214543
LamB 560..684 CDD:214597
EGF_Lam 736..783 CDD:238012
EGF_Lam 785..833 CDD:238012
Laminin_EGF 835..890 CDD:278482
EGF_Lam 889..944 CDD:238012
EGF_Lam 946..991 CDD:214543
EGF_Lam 993..1041 CDD:238012
MA 1048..1262 CDD:214599
CM_2 1109..>1165 CDD:294459
MCP_signal 1179..1358 CDD:304920
MA 1190..1424 CDD:214599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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