DRSC/TRiP Functional Genomics Resources

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Protein Alignment NetA and Ntng2

DIOPT Version :9

Sequence 1:NP_001285243.1 Gene:NetA / 32398 FlyBaseID:FBgn0015773 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_598008.1 Gene:Ntng2 / 171171 MGIID:2159341 Length:589 Species:Mus musculus


Alignment Length:521 Identity:138/521 - (26%)
Similarity:203/521 - (38%) Gaps:161/521 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ACIP------DFVNAAYDAPVVASSTCGSSGAQRYCEYQDHERSCHTCDMTDPLRSFPARSLTDL 107
            ||.|      |:|....:.   :..|||.. .:|:|.:::.....:.||.::|..:.|.|.:.|.
Mouse    38 ACQPKVMRLKDYVKVKVEP---SGITCGDP-PERFCSHENPYLCSNECDASNPDLAHPPRLMFDR 98

  Fly   108 NNSNNVTCWRSEPVTGSGD----NVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIYKSTDHGLS 168
            .:....|.|:|  ||.|..    ...:|||..|..|||..::....:. ||..||:.||.|:|.:
Mouse    99 EDEGLATYWQS--VTWSRYPSPLEANITLSWNKSVELTDDVVVTFEYG-RPTVMVLEKSLDNGRT 160

  Fly   169 WQPFQFFSSQCRRLFGRPARQS--TGRHNEHEARCSDVTRPLVSRIAFSTLE------------- 218
            |||:||::..|...||..||::  ....:.|...|::.    .||.|.|..|             
Mouse   161 WQPYQFYAEDCMEAFGMSARRARDMSPSSAHRVLCTEE----YSRWAGSKKEKHVRFEVRDRFAI 221

  Fly   219 -GRPSSRDLD-------SSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVP 275
             ..|..|::|       |:..|:::.|.||:|:   ||.||   ||     ||........|.  
Mouse   222 FAGPDLRNMDNLYTRMESAKGLKEFFTFTDLRM---RLLRP---AL-----GGTYVQRENLYK-- 273

  Fly   276 LANGPAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTDASGQLNCECSHNTAG 340
                                    ..||||:..|.||||||.||:.| |...|.|.|||.|||.|
Mouse   274 ------------------------YFYAISNIEVIGRCKCNLHANLC-TVREGSLQCECEHNTTG 313

  Fly   341 RDCERCKPFHFDRPWARAT---------------------------------------------- 359
            .||.|||.....|.|...:                                              
Mouse   314 PDCGRCKKNFRTRAWRAGSYLPLPHGSPNACAAAGSAFGSQTKPPTMAPLGDSSFWPQVSSSAEA 378

  Fly   360 ----------AKEA---------------NECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNC 399
                      ||::               .|.::|.|..|:.:|.: ::...:.      .|.:|
Mouse   379 VAISVAVPSQAKDSTLFELKPRSPQVIPIEEFQDCECYGHSNRCSY-IDFLNVV------TCVSC 436

  Fly   400 RHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGKICNSTSGQCPCKDGVTGLTCNR 464
            :|:|.|::|..|:.|:||:.:..|....||..|:|:.|||....||.| |.|.|::|..|..|:.
Mouse   437 KHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDRCNET-GFCECREGAVGPKCDD 500

  Fly   465 C 465
            |
Mouse   501 C 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetANP_001285243.1 LamNT 44..280 CDD:214532 72/263 (27%)
EGF_Lam 312..357 CDD:238012 25/44 (57%)
EGF_Lam 369..426 CDD:238012 15/56 (27%)
EGF_Lam 431..479 CDD:238012 15/35 (43%)
NTR_netrin-1_like 545..723 CDD:239634
Ntng2NP_598008.1 Laminin_N 60..285 CDD:278484 72/269 (27%)
NGL discriminant loop I. /evidence=ECO:0000250 69..88 4/18 (22%)
NGL discriminant loop II. /evidence=ECO:0000250 201..203 1/1 (100%)
NGL discriminant loop III. /evidence=ECO:0000250 264..267 0/2 (0%)
EGF_Lam 286..332 CDD:238012 25/46 (54%)
EGF_Lam 413..461 CDD:238012 14/54 (26%)
Laminin_EGF 469..516 CDD:278482 15/34 (44%)
EGF_2 516..546 CDD:285248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3512
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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