DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and cadB

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_418556.1 Gene:cadB / 948654 ECOCYCID:EG10132 Length:444 Species:Escherichia coli


Alignment Length:363 Identity:94/363 - (25%)
Similarity:153/363 - (42%) Gaps:55/363 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 RRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACG-VLSLLGALA----YAELG 141
            :::|||:...::.|.|:||||.:.|:.|    .|:| ...||   | ::|::||::    ||.|.
E. coli     5 KKIGLFACTGVVAGNMMGSGIALLPANL----ASIG-GIAIW---GWIISIIGAMSLAYVYARLA 61

  Fly   142 TMNTSSGAEWAYFMDAYGPAPAFLF---------SWVSTLVLKPSQMAIICLSFAQYAVEAFVTE 197
            |.|...|...||   |...:|||.|         :|:..|.        |.::...|....|...
E. coli    62 TKNPQQGGPIAY---AGEISPAFGFQTGVLYYHANWIGNLA--------IGITAVSYLSTFFPVL 115

  Fly   198 CDP-PRGVVKMVALVAIVMIL-FVNCYSVNLGMAVQNVFTAAKLVAVVVVICGGA---WKLMQGN 257
            .|| |.|    :|.:|||.:. |||.    ||....:..|...||.|::.:...|   |......
E. coli   116 NDPVPAG----IACIAIVWVFTFVNM----LGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAA 172

  Fly   258 TQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYA 322
            | :.:|.......:..||..:....|||:.|..:....|..:|||.:.:|.:.::|..|..:.| 
E. coli   173 T-YAANWNTADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVY- 235

  Fly   323 LINISYLAAMSPQE-MIESEAVAVTFGNRILGALAWLMPLSVTISTFG---SANGTLFAAGRLCF 383
            :.....|:.|.|.. |..|.|......:.|||  .|..||....:.|.   |....:...|:...
E. coli   236 IAATQVLSGMYPSSVMAASGAPFAISASTILG--NWAAPLVSAFTAFACLTSLGSWMMLVGQAGV 298

  Fly   384 AASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVL 421
            .|:.:|:...:...|....: |..||:..::..:|:::
E. coli   299 RAANDGNFPKVYGEVDSNGI-PKKGLLLAAVKMTALMI 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 94/363 (26%)
cadBNP_418556.1 cadB 1..435 CDD:182458 94/363 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
21.910

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