DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and frlA

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_417829.2 Gene:frlA / 947878 ECOCYCID:EG12908 Length:445 Species:Escherichia coli


Alignment Length:457 Identity:118/457 - (25%)
Similarity:199/457 - (43%) Gaps:52/457 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMN 144
            |:|:||.::.:|:.|||.:|||||||...:....|:..::.:.::..|::.:.....||||.|..
E. coli     6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAY 70

  Fly   145 TSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVA 209
            ..:||::.|..:|.....|||..|.|........::|:.|:.....  .|:|..||..|  |.:|
E. coli    71 PENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNL--GFLTPIDPLLG--KFIA 131

  Fly   210 LVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVI-CGGAWKLMQGNTQHLSNAFNGPMPNVG 273
            ...|:..:.::..||..|.|.|.:.|.||::...:|| .|..|          ..|.|...|...
E. coli   132 AGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFW----------FKAENFAAPTTT 186

  Fly   274 AI-ATAFYTGL--------WAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYL 329
            || ||..:..|        |:|.|..::.|:|.|||||.|.:||::|....||.:.|.|:.:...
E. coli   187 AIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVIS 251

  Fly   330 AAMSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTF----------GSANGTLFAAGRLCFA 384
            ..|...::..||       ..|..||.|:..|..|...|          ||.:..:....||.:|
E. coli   252 GLMPFDKLANSE-------TPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYA 309

  Fly   385 ASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFS----FTAWIFYGGAML 445
            .:::........:||.:..||...:|....:....:....:.||:.:|:    |...:.:|.   
E. coli   310 MAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGS--- 371

  Fly   446 ALIVMRYTKPNYPRPYKVPI--IIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPF 508
              |:....:.:|...::.|.  ::..:.:..|:.|||:.....|....:.|::.|..||..|..:
E. coli   372 --IIWCRKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFW 434

  Fly   509 VK 510
            .|
E. coli   435 AK 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 118/457 (26%)
frlANP_417829.2 frlA 1..445 CDD:183096 118/457 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 128 1.000 Domainoid score I255
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Inparanoid 1 1.050 139 1.000 Inparanoid score I235
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 1 1.000 - - mtm9739
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11785
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
88.060

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