DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and potE

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_415219.1 Gene:potE / 945422 ECOCYCID:EG10753 Length:439 Species:Escherichia coli


Alignment Length:461 Identity:106/461 - (22%)
Similarity:194/461 - (42%) Gaps:62/461 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 RLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVG-VSFIIWLACGVLSLLGALAYAELGTMNTS 146
            ::|:.....|.:..|:||||.:.|:.|    ..|| :|.|.||...|.|:..|.|:|:.|..:..
E. coli     8 KMGVVQLTILTMVNMMGSGIIMLPTKL----AEVGTISIISWLVTAVGSMALAWAFAKCGMFSRK 68

  Fly   147 SGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALV 211
            ||....|...|:|.:..|:.::...:.|..:.:| |.:|...|..|.......|.:     :.| 
E. coli    69 SGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVA-IAISAVGYGTELLGASLSPVQ-----IGL- 126

  Fly   212 AIVMILFVNCYSVNLGMA-----VQNVFTAAKLVAVV-VVICGGAW-----KLMQGNTQHLSNAF 265
            |.:.:|:: |...|.|.|     :.::.....::.|| :.|.|..|     .:...|..|     
E. coli   127 ATIGVLWI-CTVANFGGARITGQISSITVWGVIIPVVGLCIIGWFWFSPTLYVDSWNPHH----- 185

  Fly   266 NGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLA 330
               .|...|:.::....|||:.|..:....|:.::||.:|:|.:::.|.....:.| :::.:.:|
E. coli   186 ---APFFSAVGSSIAMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLGAAVIY-IVSTNVIA 246

  Fly   331 AMSP-QEMIESEA-VAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLD 393
            .:.| .|:..|.| ..:.|.......:..::...:.:|..||..|..|...::..::|.||:...
E. coli   247 GIVPNMELANSTAPFGLAFAQMFTPEVGKVIMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPK 311

  Fly   394 ILSYVHVRRLT----PAPGLIFHSLIASAMV-------LHGTIDSLIDFFSFTAWIFYGGAMLAL 447
            |.|     |:|    |..|::...:|.|.:.       |:...:.|::....|..|.|..:|.||
E. coli   312 IFS-----RVTKVDAPVQGMLTIVIIQSGLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAAL 371

  Fly   448 IVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPFVKLG 512
            ::::......|...||...:..|..:.|.|    .::.:.....||..:..|.|...|      |
E. coli   372 VIIQKVANVPPSKAKVANFVAFVGAMYSFY----ALYSSGEEAMLYGSIVTFLGWTLY------G 426

  Fly   513 M-TPRF 517
            : :|||
E. coli   427 LVSPRF 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 106/461 (23%)
potENP_415219.1 potE 4..439 CDD:182622 106/461 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
21.910

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