DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and pheP

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_415108.1 Gene:pheP / 945199 ECOCYCID:EG10708 Length:458 Species:Escherichia coli


Alignment Length:489 Identity:102/489 - (20%)
Similarity:185/489 - (37%) Gaps:101/489 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVS 119
            |.|..|...::|....|....|:            ..:.:|..||:|:|:.....:...|..   
E. coli     6 TVSEDTASNQEPTLHRGLHNRHI------------QLIALGGAIGTGLFLGIGPAIQMAGPA--- 55

  Fly   120 FIIWLACGVLSLLGALAYAELGTM---NTSSGAEWAYFMDAY-GPAPAFLFSWVSTLVLKPSQMA 180
              :.|..||..::..|...:||.|   ...||: :|:|...| ||...||..|...::.....||
E. coli    56 --VLLGYGVAGIIAFLIMRQLGEMVVEEPVSGS-FAHFAYKYWGPFAGFLSGWNYWVMFVLVGMA 117

  Fly   181 IICLS--FAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVV 243
            .:..:  :.||...      |.|..:   .|....::|..||..:|.|....:..|...|::|::
E. coli   118 ELTAAGIYMQYWFP------DVPTWI---WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAII 173

  Fly   244 VVICGGAWKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLWAY-----DGWNNL----------- 292
            .:|..|.|.|..|:....::..|                ||.|     .|||.|           
E. coli   174 GMIGFGLWLLFSGHGGEKASIDN----------------LWRYGGFFATGWNGLILSLAVIMFSF 222

  Fly   293 ------NYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEA--VAVTFGN 349
                  .....|.::|.|::|:::...:..:.|.| :.::..|.|:.|...::|.:  ..:.|.|
E. coli   223 GGLELIGITAAEARDPEKSIPKAVNQVVYRILLFY-IGSLVVLLALYPWVEVKSNSSPFVMIFHN 286

  Fly   350 RILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSL 414
            .....:|..:...:.:::....|..:::..|:.|..|.:|:....|:.|. ||..|...|:....
E. coli   287 LDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVS-RRGVPINSLMLSGA 350

  Fly   415 IASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLV 479
            |.|.:||   |:.|:...:|       |.::||:|             ..:::..:::.::....
E. coli   351 ITSLVVL---INYLLPQKAF-------GLLMALVV-------------ATLLLNWIMICLAHLRF 392

  Fly   480 AAPIFETPRVEYLYALLFIFAGLIFYVPFVKLGM 513
            .|.:....|.....|||:.|..   |:....|||
E. coli   393 RAAMRRQGRETQFKALLYPFGN---YLCIAFLGM 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 102/489 (21%)
phePNP_415108.1 PRK10249 1..458 CDD:236667 102/489 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.