DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and ydgI

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_416122.1 Gene:ydgI / 945159 ECOCYCID:G6861 Length:460 Species:Escherichia coli


Alignment Length:516 Identity:109/516 - (21%)
Similarity:200/516 - (38%) Gaps:117/516 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LERRLGLFSGVALIVGTMIGSGIF---------VSPSGLLVRTGSVGVSFIIWLACGVLSLL--- 132
            :|::|||.:..||::.:|:|:|:|         .||:.||:..|..|.. |:.||..:|.|.   
E. coli     1 MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAG-ILLLAFAMLILTRIR 64

  Fly   133 -----GALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVE 192
                 |...||..|.      .|...|..|:|       .|:..::...|.:.|:      ::..
E. coli    65 PELDGGIFTYAREGF------GELIGFCSAWG-------YWLCAVIANVSYLVIV------FSAL 110

  Fly   193 AFVTECDPP-----------RGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKL--VAVVV 244
            :|.|  |.|           :.:|...||:.||..|.:.  .|....::..|.|.|||  :.:.|
E. coli   111 SFFT--DTPELRLFGDGNTWQSIVGASALLWIVHFLILR--GVQTAASINLVATLAKLLPLGLFV 171

  Fly   245 VICGGAWKLMQGNTQHLSNAFNG---PMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNL 306
            |:....:||   :|..|.  |.|   .:|....:.......||.:.|......|:...:| .:::
E. coli   172 VLAMMMFKL---DTFKLD--FTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN-KRDV 230

  Fly   307 PRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVT---------FGNRILGA-------- 354
            .::.::.:......|.|:.:..|..::..|:.|....::.         :|..|:.|        
E. coli   231 GKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCG 295

  Fly   355 --LAW-LMPLSVT-ISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSL- 414
              |:| :|...|. ::....|...:||......|.|....|.:|...:.: .|....|..:::| 
E. coli   296 AYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICL-VLIWLTGSDYNTLL 359

  Fly   415 -IASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYL 478
             |||.|:       |:.:|..       ||.|..|.   |:|.:.       .:.|...:..::|
E. coli   360 TIASEMI-------LVPYFLV-------GAFLLKIA---TRPLHK-------AVGVGACIYGLWL 400

  Fly   479 VAAPIFETPRVEYLYALLFIFAGLIFYVPFVKLGMTPRFMNK--VTLFFQLLLEVVPTSSM 537
                ::.:..:..|.:::....||:.::...|.......:|:  :.|...||:..||.:.|
E. coli   401 ----LYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWM 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 106/509 (21%)
ydgINP_416122.1 2A0302 3..460 CDD:129983 108/514 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
21.910

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