DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and CAN1

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_010851.1 Gene:CAN1 / 856646 SGDID:S000000789 Length:590 Species:Saccharomyces cerevisiae


Alignment Length:590 Identity:118/590 - (20%)
Similarity:210/590 - (35%) Gaps:195/590 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PTKTTSNGTMCANGSLGTEGPEAPETDSSGTGRMRKPLERNGSTQNHVVHLE---RRLGLFSGVA 91
            ||:.....|......:|.|.                    .|..||..|..|   |.:|:     
Yeast    56 PTRVNGEDTFSMEDGIGDED--------------------EGEVQNAEVKRELKQRHIGM----- 95

  Fly    92 LIVGTMIGSGIFVSPSGLLVRTGSVG--VSFIIWLACGVLSLLGALAYA---ELGTMN-----TS 146
            :.:|..||:|:|:..|..|...|.||  :|::         .:|:|||:   .||.|.     ||
Yeast    96 IALGGTIGTGLFIGLSTPLTNAGPVGALISYL---------FMGSLAYSVTQSLGEMATFIPVTS 151

  Fly   147 SGAEWA--YFMDAYGPAPAFL--FSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKM 207
            |...::  :...|:|.|..::  |||..|..|:.|.:..: :.|..|.              |.:
Yeast   152 SFTVFSQRFLSPAFGAANGYMYWFSWAITFALELSVVGQV-IQFWTYK--------------VPL 201

  Fly   208 VALVAI--VMILFVNCYSVNLGMAVQNVFTAAKLVAVV-------VVICG--------------- 248
            .|.::|  |:|..:|.:.|......:....:.|::|::       .::||               
Yeast   202 AAWISIFWVIITIMNLFPVKYYGEFEFWVASIKVLAIIGFLIYCFCMVCGAGVTGPVGFRYWRNP 266

  Fly   249 GAWKLMQGNTQHLSNAFNGP------------MPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKN 301
            |||               ||            :..|.::..|.:|    :.|...:.....|..|
Yeast   267 GAW---------------GPGIISKDKNEGRFLGWVSSLINAAFT----FQGTELVGITAGEAAN 312

  Fly   302 PSKNLPRSI--IIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVT---------FGNRILGAL 355
            |.|::||:|  ::...|.....:|:.|..|...:..::.:|.:...|         .|.::|..:
Yeast   313 PRKSVPRAIKKVVFRILTFYIGSLLFIGLLVPYNDPKLTQSTSYVSTSPFIIAIENSGTKVLPHI 377

  Fly   356 AWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILS--------YVHVRRLTPAPGL--- 409
            ...:.|:..||   :||..::...|:.|..|:.......||        |:.| .:|.|.|.   
Yeast   378 FNAVILTTIIS---AANSNIYVGSRILFGLSKNKLAPKFLSRTTKGGVPYIAV-FVTAAFGALAY 438

  Fly   410 ---------IFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPR------ 459
                     :|..|:        .|..:..||   ||:|     :::..:|:.:....|      
Yeast   439 METSTGGDKVFEWLL--------NITGVAGFF---AWLF-----ISISHIRFMQALKYRGISRDE 487

  Fly   460 -PYKVPII---------IPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGL------IFYVPF 508
             |:|..::         ...::::|..:...||.|........|..:|:|..:      ||...|
Yeast   488 LPFKAKLMPGLAYYAATFMTIIIIIQGFTAFAPKFNGVSFAAAYISIFLFLAVWILFQCIFRCRF 552

  Fly   509 V-KLG 512
            : |:|
Yeast   553 IWKIG 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 113/567 (20%)
CAN1NP_010851.1 2A0310 85..562 CDD:273334 109/541 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345700
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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