DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and ALP1

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_014129.1 Gene:ALP1 / 855451 SGDID:S000005214 Length:573 Species:Saccharomyces cerevisiae


Alignment Length:583 Identity:110/583 - (18%)
Similarity:208/583 - (35%) Gaps:190/583 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GHNVPTKTTSNGTMCANGSLGTEGPEAPETDSSGTGR--MRKPLERNGSTQNHVVHLERRLGLFS 88
            |.||....|:...:        |...|.||:||...|  :::.|:            :|.:|:  
Yeast    35 GENVTKAITTERKV--------EDDAAKETESSPQERREVKRKLK------------QRHIGM-- 77

  Fly    89 GVALIVGTMIGSGIFVSPSGLLVRTGSVG--VSFIIWLACGVLSLLGALAYA---ELGTM----- 143
               :.:|..||:|:.:.....|...|.||  :|::         .:|.:.|:   .||.|     
Yeast    78 ---IALGGTIGTGLIIGIGPPLAHAGPVGALISYL---------FMGTVIYSVTQSLGEMVTFIP 130

  Fly   144 NTSSGAEWA--YFMDAYGPAPAFLF--SWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGV 204
            .|||.:.:|  :...|.|....:::  ||..|..|:.|.:..:    .||..||           
Yeast   131 VTSSFSVFAQRFLSPALGATNGYMYWLSWCFTFALELSVLGKV----IQYWTEA----------- 180

  Fly   205 VKMVALVAIVMILF--VNCYSVNLGMAVQNVFTAAKLVAVV-------VVICG------------ 248
            |.:.|.:.|...|.  :|.:.|......:....:.|::|::       .|:||            
Yeast   181 VPLAAWIVIFWCLLTSMNMFPVKYYGEFEFCIASIKVIALLGFIIFSFCVVCGAGQSDGPIGFRY 245

  Fly   249 ----GAWKLMQGNTQHLSNAFNGP------------MPNVGAIATAFYTGLWAYDGWNNLNYVTE 297
                |||               ||            :..|.::..|.:|    |.|...:.....
Yeast   246 WRNPGAW---------------GPGIISSDKNEGRFLGWVSSLINAAFT----YQGTELVGITAG 291

  Fly   298 EIKNPSKNLPRSI---IIGIPLVTLCYALINISYLAAMSPQE---------MIESEAVAVTFGNR 350
            |..||.|.|||:|   ::.|    |.:.::::.::..:.|..         .:.|....::..|.
Yeast   292 EAANPRKALPRAIKKVVVRI----LVFYILSLFFIGLLVPYNDPKLDSDGIFVSSSPFMISIENS 352

  Fly   351 ILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLI 415
            ....|..:....|.|:...:.|..::...|:.::.|:.......||.|      ...|:.:.|::
Yeast   353 GTKVLPDIFNAVVLITILSAGNSNVYIGSRVLYSLSKNSLAPRFLSNV------TRGGVPYFSVL 411

  Fly   416 ASAMVLHGTIDSLIDFFSFTA----------WI--------FYGGAMLALIVMRYTKPNYPR--- 459
            ::         |:..|.:|..          |:        |:...:::...:|:.:....|   
Yeast   412 ST---------SVFGFLAFLEVSAGSGKAFNWLLNITGVAGFFAWLLISFSHIRFMQAIRKRGIS 467

  Fly   460 ----PYKVPII----------IPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPF 508
                |||..::          |.::|| |..:...||.|:.  ::::.|.:.||..|..::.|
Yeast   468 RDDLPYKAQMMPFLAYYASFFIALIVL-IQGFTAFAPTFQP--IDFVAAYISIFLFLAIWLSF 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 104/556 (19%)
ALP1NP_014129.1 2A0310 67..545 CDD:273334 99/543 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345701
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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