DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and PUT4

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_014993.1 Gene:PUT4 / 854530 SGDID:S000005875 Length:627 Species:Saccharomyces cerevisiae


Alignment Length:538 Identity:109/538 - (20%)
Similarity:201/538 - (37%) Gaps:113/538 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NNSTDNNRGHNVPTK-------TTSNGTMCANGSLGTEGPEAPETDSSGTGRMRKPLERNGSTQN 75
            |:.:||.:...:..:       .:||||:..:..:..:..::|..|...     :|.:.....|:
Yeast    53 NHRSDNEKDDAIRMEKISKNQSASSNGTIREDLIMDVDLEKSPSVDGDS-----EPHKLKQGLQS 112

  Fly    76 HVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVG--VSFIIWLAC--GVLSLLGALA 136
            ..|.|           :.:|..||:|:.|..|..|...|..|  :|:||..|.  .::..||.:.
Yeast   113 RHVQL-----------IALGGAIGTGLLVGTSSTLHTCGPAGLFISYIIISAVIYPIMCALGEMV 166

  Fly   137 YAELGTMNTSSGAEWAYFMDAY-GPAPAFLFSW---VSTLVLKPSQMAIICLSFAQYAVEAFVTE 197
            ....|..:.|:|:. |..:..| .|:..|...|   ...::|    :|..|.: |...||.:.|.
Yeast   167 CFLPGDGSDSAGST-ANLVTRYVDPSLGFATGWNYFYCYVIL----VAAECTA-ASGVVEYWTTA 225

  Fly   198 CDPPRGVVKMVALVAIVMILF--VNCYSVNLGMAVQNVFTAAKLVAVV-------VVICGGA--- 250
            .  |:||...:.|..:|::.|  |..|..:     :..|.:.|::.:|       ::..||.   
Yeast   226 V--PKGVWITIFLCVVVILNFSAVKVYGES-----EFWFASIKILCIVGLIILSFILFWGGGPNH 283

  Fly   251 -------WKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTE-EIKNPSKNLP 307
                   |:.......||:   .|.:.|...|.|....|.:|:.....|..:|. |..:..:|:.
Yeast   284 DRLGFRYWQHPGAFAHHLT---GGSLGNFTDIYTGIIKGAFAFILGPELVCMTSAECADQRRNIA 345

  Fly   308 RS-------IIIGIPLVTLCYALI-------NISYLAAMSPQEMIESEAVAVTFGNRILGALAWL 358
            ::       :|....|.||..::|       .::.||...|.  ..|....:...|..:..|..:
Yeast   346 KASRRFVWRLIFFYVLGTLAISVIVPYNDPTLVNALAQGKPG--AGSSPFVIGIQNAGIKVLPHI 408

  Fly   359 MPLSVTISTFGSANGTLFAAGRLCFAASREGH----------------------LLDILSYVHVR 401
            :...:..|.:.:||..:||:.|.....::.|.                      |...|:|::|.
Yeast   409 INGCILTSAWSAANAFMFASTRSLLTMAQTGQAPKCLGRINKWGVPYVAVGVSFLCSCLAYLNVS 473

  Fly   402 RLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKV--P 464
            ..| |....:.|.|::.....|.:...|.:..|...|||.|     :..|.....:.:||.|  .
Yeast   474 SST-ADVFNWFSNISTISGFLGWMCGCIAYLRFRKAIFYNG-----LYDRLPFKTWGQPYTVWFS 532

  Fly   465 IIIPVVVLVISVYLVAAP 482
            :|:..::.:.:.|.:..|
Yeast   533 LIVIGIITITNGYAIFIP 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 102/496 (21%)
PUT4NP_014993.1 2A0310 107..593 CDD:273334 99/479 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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