DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and GAP1

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_012965.3 Gene:GAP1 / 853912 SGDID:S000001747 Length:602 Species:Saccharomyces cerevisiae


Alignment Length:568 Identity:125/568 - (22%)
Similarity:223/568 - (39%) Gaps:109/568 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KNNSTDNNRGHNVPT-----KTTSNGTMCANGSLGTEGPEAPETDSSGTG----------RMRKP 66
            |||  .:|..||..|     .|....|:.:|||       |...|.:|:|          :..||
Yeast     9 KNN--PDNLKHNGITIDSEFLTQEPITIPSNGS-------AVSIDETGSGSKWQDFKDSFKRVKP 64

  Fly    67 LE--RNGSTQNHVV----------HLE-RRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGV 118
            :|  .|.|....|.          ||: |.|.:     :.:|..||:|:.|. ||..:|||....
Yeast    65 IEVDPNLSEAEKVAIITAQTPLKHHLKNRHLQM-----IAIGGAIGTGLLVG-SGTALRTGGPAS 123

  Fly   119 SFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAY---FMD-AYGPAPAF--LFSWVSTLVLKPS 177
            ..|.|.:.|.:.....:|..||..:...||....|   |:| ::|.|..|  :..|:..|.|:  
Yeast   124 LLIGWGSTGTMIYAMVMALGELAVIFPISGGFTTYATRFIDESFGYANNFNYMLQWLVVLPLE-- 186

  Fly   178 QMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAV 242
                  :..|...|..:.|:   |:.....|||..:.::: :|.:.|......:.||:..|::.|
Yeast   187 ------IVSASITVNFWGTD---PKYRDGFVALFWLAIVI-INMFGVKGYGEAEFVFSFIKVITV 241

  Fly   243 V-------VVICGG--AWKLMQGNTQHLSNAFNGPMPNVGA----IATAFYTGLWAYDGWNNLNY 294
            |       ::.|||  ....:.|...|...||.|..|  ||    :.:.|.|..:::.|...:..
Yeast   242 VGFIILGIILNCGGGPTGGYIGGKYWHDPGAFAGDTP--GAKFKGVCSVFVTAAFSFAGSELVGL 304

  Fly   295 VTEEIKNPSKNLPRSIIIGIPLVTLCY--ALINISYLAAMSPQEMIESEAV-------AVTFGNR 350
            ...|...|.|::|::.......:||.|  :|:.|..|...:.:.:|.:.:|       .:.....
Yeast   305 AASESVEPRKSVPKAAKQVFWRITLFYILSLLMIGLLVPYNDKSLIGASSVDAAASPFVIAIKTH 369

  Fly   351 ILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVR-------RLTPAPG 408
            .:..|..::.:.:.|:.....|..::|..|...|.:.:..|.:|.|||..:       .:|.|.|
Yeast   370 GIKGLPSVVNVVILIAVLSVGNSAIYACSRTMVALAEQRFLPEIFSYVDRKGRPLVGIAVTSAFG 434

  Fly   409 LIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPR-----PYKVP---- 464
            ||  :.:|::.......:.|:.....::...:||..:..|..|.......|     .:|.|    
Yeast   435 LI--AFVAASKKEGEVFNWLLALSGLSSLFTWGGICICHIRFRKALAAQGRGLDELSFKSPTGVW 497

  Fly   465 -----IIIPVVVLVISVYLVAAPIFETPRVE-YLYALLFIFAGLIFYV 506
                 :.:.:::.:...|:...|:.::|..| :..|.|.....::.|:
Yeast   498 GSYWGLFMVIIMFIAQFYVAVFPVGDSPSAEGFFEAYLSFPLVMVMYI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 112/527 (21%)
GAP1NP_012965.3 2A0310 87..566 CDD:273334 103/481 (21%)

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