DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and HIP1

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_011707.1 Gene:HIP1 / 853104 SGDID:S000003423 Length:603 Species:Saccharomyces cerevisiae


Alignment Length:396 Identity:88/396 - (22%)
Similarity:155/396 - (39%) Gaps:64/396 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SLGTEGPEAPETDSSGTGRMRKPLERNGSTQNHVV---HLERRLGLFSGVALIVGTMIGSGIFVS 105
            |..:.|......|.:.:.|.|    ||..|:...:   :|.:.|.:...:.|.||..||:|::|:
Yeast    51 SKDSPGINQTTNDITSSDRFR----RNEDTEQEDINNTNLSKDLSVRHLLTLAVGGAIGTGLYVN 111

  Fly   106 PSGLLVRTG---SVGVSFIIWLAC--GVLSLLGAL--AYAELGTMNTSSGAEWAYFMDAYGPAPA 163
             :|..:.||   |:.:.::|...|  .|::.||.|  |:..:|..|       .|.|....|:.|
Yeast   112 -TGAALSTGGPASLVIDWVIISTCLFTVINSLGELSAAFPVVGGFN-------VYSMRFIEPSFA 168

  Fly   164 F------LFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCY 222
            |      |..|   |||.|.::..     |...::.:..:.:....|....|.:|:..:|.|..:
Yeast   169 FAVNLNYLAQW---LVLLPLELVA-----ASITIKYWNDKINSDAWVAIFYATIALANMLDVKSF 225

  Fly   223 SVNLGMAVQNVFTAAKLVAV-------VVVICGGA--WKLMQGNTQHLSNAFNGPMPNV--GAIA 276
            .     ..:.|.:..|::::       :|:.|||.  ...:.|...|...||.|.....  ..:.
Yeast   226 G-----ETEFVLSMIKILSIIGFTILGIVLSCGGGPHGGYIGGKYWHDPGAFVGHSSGTQFKGLC 285

  Fly   277 TAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQE----- 336
            :.|.|..::|.|.........|.|||.:.:|::......|:|..|..| ::.:..:.|..     
Yeast   286 SVFVTAAFSYSGIEMTAVSAAESKNPRETIPKAAKRTFWLITASYVTI-LTLIGCLVPSNDPRLL 349

  Fly   337 ------MIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDIL 395
                  ...|..:.:...|..:..|..||...:.|:....||..::|..|...|.:..|:|...|
Yeast   350 NGSSSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMAHIGNLPKFL 414

  Fly   396 SYVHVR 401
            :.|..|
Yeast   415 NRVDKR 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 86/387 (22%)
HIP1NP_011707.1 2A0310 88..567 CDD:273334 79/355 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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