DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and MUP1

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_011569.1 Gene:MUP1 / 852946 SGDID:S000003287 Length:574 Species:Saccharomyces cerevisiae


Alignment Length:577 Identity:138/577 - (23%)
Similarity:241/577 - (41%) Gaps:124/577 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RDKISQLFCLQKNACKNNSTDNNRGHNVPTKTTSNGTMCA-NGSLGTEGPE--APETDSSGTGRM 63
            |..:|||....|...:.:|:...       |..||.|:.| ||:...|..:  |.|.|..     
Yeast     5 RTFLSQLNVFNKENYQFSSSTTK-------KEVSNSTVDADNGASDFEAGQQFATELDQG----- 57

  Fly    64 RKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGV 128
                             |::||:.|.:.||...|:|:|:|...|.:....||||::.|:|....:
Yeast    58 -----------------EKQLGILSCIGLICNRMLGTGVFAVSSTIYTLCGSVGLALIMWAVGAI 105

  Fly   129 LSLLGALAYAELGTMNTSSGAEWAY----------FMDAYGPAPAFLFSWVSTLVLKPSQMAIIC 183
            :::.|...|.|.||....:|.|..|          |:.....|..|...|.:.   .....||:.
Yeast   106 IAISGLYVYMEFGTAIPKNGGEKNYLEAIFRKPKFFITCMYAAYIFFLGWAAG---NSINTAIMF 167

  Fly   184 LSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILF-VNCYSVNLGMAVQNVFTAAKLVAVVVVIC 247
            |:    |.:..||:.: .||:.     ||:|...| :|..:|.:|:.:||:....| :.:|:.|.
Yeast   168 LT----AADTEVTKWN-QRGIG-----VAVVFFAFLINSLNVKIGLYLQNILGIFK-IGIVLFIS 221

  Fly   248 GGAWKLMQG------NTQHLSNAFNG-PMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKN 305
            ...|..:.|      .:.:..|||.| .......|..|.|:.:|::.|::|:||...|:|||.:.
Yeast   222 ITGWVALGGGLKDGYQSHNFRNAFEGTETATAYGIVNALYSVIWSFVGYSNVNYALGEVKNPVRT 286

  Fly   306 L----PRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVA------VTFGNRILGALAWLMP 360
            |    |.|::    .:.:.|..:||:|.|.:...::|.|:.:.      :.||.:...|.|.|  
Yeast   287 LKIAGPTSMV----FLAIIYIFVNIAYFAVVPKDKLISSKLILAADFFDIVFGGQAKRAAAAL-- 345

  Fly   361 LSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRR--LTPAPGLIFHSLIASAMVL-- 421
              |.:|..|:....:|:.||:.....||| :|...::....:  .:|..||..|.::.:..:|  
Yeast   346 --VGLSALGNVLSVIFSQGRIIQQLGREG-VLPFSNFFASSKPFNSPMVGLFQHFIVCTVTILAP 407

  Fly   422 -----HGTIDSLIDF------FSFTA---WIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVL 472
                 :..:.:||.:      |:.:|   ||::        ..|..|..:..|.|..:.:.....
Yeast   408 PPGDAYLLVQNLISYPMNIINFAISAGLLWIYW--------QRRQGKIEWNPPIKAGVFVTGFFT 464

  Fly   473 VISVYLVAAPIFETPRVEYLYAL------------LFIFAGLIFYVPFVKLGMTPRF 517
            :.::||:.||.......|.:|:.            :|.|.| ::||.:.:|  .||:
Yeast   465 LSNLYLIIAPYVPPSNGESVYSSMPYWIHCVIAWGIFFFGG-VYYVVWAQL--LPRW 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 123/523 (24%)
MUP1NP_011569.1 2A0308 1..541 CDD:273332 138/577 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I1105
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I1189
Isobase 1 0.950 - 0 Normalized mean entropy S1752
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 1 1.000 - - mtm9156
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11785
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
TreeFam 00.000 Not matched by this tool.
109.940

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