DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and BAP2

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_009624.4 Gene:BAP2 / 852360 SGDID:S000000272 Length:609 Species:Saccharomyces cerevisiae


Alignment Length:574 Identity:119/574 - (20%)
Similarity:219/574 - (38%) Gaps:145/574 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TTSNGTMCANGSLGTEGPEAPETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTM 97
            ||....:..|.|...:|.|:..:||    :::|.::     ..|||.:.            :||.
Yeast    65 TTRTKQINENTSDLEDGVESITSDS----KLKKSMK-----SRHVVMMS------------LGTG 108

  Fly    98 IGSGIFVS---------PSGLLVRTGSVGVSFIIWL---ACGVLSLLGALAYAEL-GTMNTSSGA 149
            ||:|:.|:         |:.|::  |.:.|||:.:.   |.|.:    |:.|..| ...|..|. 
Yeast   109 IGTGLLVANAKGLHYGGPAALII--GYILVSFVTYFMIQAAGEM----AVTYPTLPANFNAYSS- 166

  Fly   150 EWAYFMDAYGPAPAFL--FSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVA 212
              .:...::|.|..:|  |.|::.|.|:        |..|...::.:..:.:|     .:..|:.
Yeast   167 --IFISKSFGFATVWLYCFQWLTVLPLE--------LITASMTIQFWNDKINP-----DIYILIF 216

  Fly   213 IVMILFVNCYSVNLGMAVQNVFTAAKLVAV-------VVVICGGAWKLMQGNT-------QHLSN 263
            .|.::|::.:.|......:.:|...|::.:       :|:.||||     ||.       .|...
Yeast   217 YVFLVFIHFFGVKAYGETEFIFNCCKILMIAGFIILSIVINCGGA-----GNDGYIGATYWHNPG 276

  Fly   264 AFNGPMPNVGAIATAFY---TGLWAYDGWNNLNYVTEEIKNPSKNLP----RSI--IIGIPLVTL 319
            ||.|. .::|......|   |..:::.|........:|..||.|:.|    |||  |:.|.|:|:
Yeast   277 AFAGD-TSIGRFKNVCYILVTAYFSFGGMELFALSVQEQSNPRKSTPVAAKRSIYRIVVIYLLTM 340

  Fly   320 CYALINISYLAAMSPQEMIESEAVAVTFGNRILGA-------LAWLMPLSVTISTFGSANGTLFA 377
            .....|:.|    :..:::.:...|......:|.|       :..::...:.||....||.:|:|
Yeast   341 ILIGFNVPY----NDDQLMGAGGSATHASPYVLAASIHGVKIVPHIINAVILISVVSVANSSLYA 401

  Fly   378 AGRLCFAASREGHLLDILSYVHVRRLTPAPGLI---------FHSLIASAMVLH---GTIDSLID 430
            ..||..:.:::|:....|.||. |...|...||         |.:..:...::.   ..|..|.:
Yeast   402 GPRLICSLAQQGYAPKFLDYVD-REGRPLRALIVCCVFGVIAFVAASSKEEIVFTWLAAIAGLSE 465

  Fly   431 FFSFTAWIFYGGAMLALIVMRYTKPNYPRP-----YKVP---------IIIPVVVLVISVYLVAA 481
            .|::|:      .||:.:..|.......|.     ||..         :...::|.|...::..|
Yeast   466 LFTWTS------IMLSHLRFRQAMKVQGRSLDELGYKATTGIWGSIYGVFFNILVFVAQFWVALA 524

  Fly   482 PI----------FETPRVEYLYALLFIFAGLIFYVPFVKLGMTPRFMNKVTLFF 525
            |:          |....:.:...|.|.|..:::...|..|..    ::|:.|.|
Yeast   525 PLGNGGKCDAESFFQNYLAFPIWLAFYFGYMVYNRDFTLLNP----LDKIDLDF 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 113/554 (20%)
BAP2NP_009624.4 2A0310 92..573 CDD:273334 109/540 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345666
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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