DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and GNP1

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_010796.1 Gene:GNP1 / 852121 SGDID:S000002916 Length:663 Species:Saccharomyces cerevisiae


Alignment Length:570 Identity:118/570 - (20%)
Similarity:208/570 - (36%) Gaps:153/570 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NVPTKTTSNGTMCANGSLGTEGPEAPETDSSG---------------TGRMRKPLERNGSTQNHV 77
            |.|..:.||||.    .:.|:       |||.               .|..:.|.|:....:|  
Yeast    93 NSPDSSNSNGTT----PISTK-------DSSSQLDNELNRKSSYITVDGIKQSPQEQEQKQEN-- 144

  Fly    78 VHLERRLGLFSGVALIVGTMIGSGIFV---------SPSGLLVRTGSVG-VSFIIWLACGVLSLL 132
              |::.:.....|.:.:||.||:|:.|         .|.||::....:| ..:.|..|||.|   
Yeast   145 --LKKSIKPRHTVMMSLGTGIGTGLLVGNSKVLNNAGPGGLIIGYAIMGSCVYCIIQACGEL--- 204

  Fly   133 GALAYAEL-GTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIIC---LSFAQYAVEA 193
             |:.|::| |..||       |.:....||..|..:|:..|     |...:|   |..|...::.
Yeast   205 -AVIYSDLIGGFNT-------YPLFLVDPALGFSVAWLFCL-----QWLCVCPLELVTASMTIKY 256

  Fly   194 FVTECDPPRGVVKMVALVAIVMI----------LFVNCYSVNLGMAVQNVFTAAKLVAVVVVICG 248
            :.|..:|...||....|:.::.:          .|.||..:   :.:...|     :..:::.||
Yeast   257 WTTSVNPDVFVVIFYVLIVVINVFGAKGYAEADFFFNCCKI---LMIVGFF-----ILAIIIDCG 313

  Fly   249 GAWKLMQGNTQHLSN-------AFNGPMP---NVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPS 303
            ||     |...::.:       ||.|..|   ..|.:|| |.|..:|:.....|.....|..||.
Yeast   314 GA-----GTDGYIGSKYWRDPGAFRGDTPIQRFKGVVAT-FVTAAFAFGMSEQLAMTASEQSNPR 372

  Fly   304 KNLP---RSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAV----------TFGNRI---- 351
            |.:|   :.:|..|..|.|. :|..:.:|...:..:::.:...|.          :.|.|:    
Yeast   373 KAIPSAAKKMIYRILFVFLA-SLTLVGFLVPYTSDQLLGAAGSATKASPYVIAVSSHGVRVVPHF 436

  Fly   352 LGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIA 416
            :.|:..|..|||       |||..:.:.|:..:.:::|:......|:. |...||..::..:|. 
Yeast   437 INAVILLSVLSV-------ANGAFYTSSRILMSLAKQGNAPKCFDYID-REGRPAAAMLVSALF- 492

  Fly   417 SAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKV------------------ 463
            ..:....:.....|.|::...|.....:...|.:..:...:.|..||                  
Yeast   493 GVIAFCASSKKEEDVFTWLLAISGLSQLFTWITICLSHIRFRRAMKVQGRSLGEVGYKSQVGVWG 557

  Fly   464 ---PIIIPVVVLVISVYLVAAPI-----------FETPRVEYLYALLFIF 499
               .:::.|:.|:...::..|||           ||......::..|:||
Yeast   558 SAYAVLMMVLALIAQFWVAIAPIGGGGKLSAQSFFENYLAMPIWIALYIF 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 111/545 (20%)
GNP1NP_010796.1 2A0310 146..626 CDD:273334 103/502 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345714
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.880

Return to query results.
Submit another query.