DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and BAP3

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_010331.3 Gene:BAP3 / 851616 SGDID:S000002453 Length:604 Species:Saccharomyces cerevisiae


Alignment Length:627 Identity:136/627 - (21%)
Similarity:236/627 - (37%) Gaps:160/627 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRDKISQLFCLQKNACKNNSTDNNRGHNVPTKTTSNGTMCANGSLGTEGPEAPE-TDSSGTGRMR 64
            |.|.|.....::|:| :...||:...:|..|.||::.|           ||..| ::.|..|.:.
Yeast     1 MSDPIVTSSKMEKSA-EFEVTDSALYNNFNTSTTASLT-----------PEIKEHSEESRNGLVH 53

  Fly    65 K-----------------PLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVS------- 105
            :                 .||....:.....||::.:.....|.:.:||.||:|:.|:       
Yeast    54 RFVDSFRRAESQRLEEDNDLEDGTKSMKSNNHLKKSMKSRHVVMMSLGTGIGTGLLVANAKGLSL 118

  Fly   106 --PSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAEL-GTMNTSSGAEWAYFMDAYGPAPAFLF- 166
              |..|::  |.|.|||:.:........:| :.|..| |..|..:.   .:...::|.|..:|| 
Yeast   119 AGPGSLVI--GYVMVSFVTYFMVQAAGEMG-VTYPTLPGNFNAYNS---IFISKSFGFATTWLFC 177

  Fly   167 -SWVSTLVLK--PSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGM 228
             .|::.|.|:  .|.|.:   .:....:.|.|            ..::..|.:||::.:.|....
Yeast   178 IQWLTVLPLELITSSMTV---KYWNDTINADV------------FIVIFYVFLLFIHFFGVKAYG 227

  Fly   229 AVQNVFTAAKLVAV-------VVVICGGAWKLMQGNTQHLSNAF---NGPMPNVGAIATAF---- 279
            ..:.:|.:.|::.|       ||:.||||     |...::...:   .|.... |:.||.|    
Yeast   228 ETEFIFNSCKILMVAGFIILSVVINCGGA-----GVDGYIGGKYWRDPGSFAE-GSGATRFKGIC 286

  Fly   280 YTGLWAYDGWNNLNYVT---EEIKNPSKNLP----RSI--IIGIPLVTLCYALINISYLAAMSPQ 335
            |..:.||..:..:....   .|..||.|:.|    ||:  |:.|.|:|:.....|:.:    :..
Yeast   287 YILVSAYFSFGGIELFVLSINEQSNPRKSTPVAAKRSVYRILIIYLLTMILIGFNVPH----NND 347

  Fly   336 EMIESEAVAVTFGNRILGA-------LAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLD 393
            :::.|...|......:|.|       :..::...:.||....||..|:||.||..:.:::|:...
Yeast   348 QLMGSGGSATHASPYVLAASIHKVRVIPHIINAVILISVISVANSALYAAPRLMCSLAQQGYAPK 412

  Fly   394 ILSYVHVRRLTPAPGLIFHSLIA------------SAMVLHGTIDSLIDFFSFTAWIFYGGAMLA 446
            .|:|:. |...|...|:..||:.            .|......|..|.:.|:      :.|.||:
Yeast   413 FLNYID-REGRPLRALVVCSLVGVVGFVACSPQEEQAFTWLAAIAGLSELFT------WSGIMLS 470

  Fly   447 LIVMRYTKPNYPRP-----YKV---------PIIIPVVVLVISVYLVAAPI-----------FET 486
            .|..|.......|.     ||.         .:...::|.:...::..:||           ||:
Yeast   471 HIRFRKAMKVQGRSLDEVGYKANTGIWGSYYGVFFNMLVFMAQFWVALSPIGNGGKCDAQAFFES 535

  Fly   487 PRVEYLYALLFIFAGLIFYVPFVKLGMTPRFMN---KVTLFF 525
                ||.|.|:||    .||.::.......|:|   |:.|.|
Yeast   536 ----YLAAPLWIF----MYVGYMVYKRDFTFLNPLDKIDLDF 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 122/575 (21%)
BAP3NP_010331.3 LysP 40..603 CDD:223903 122/576 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345667
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.880

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