DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and AGP3

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_116600.1 Gene:AGP3 / 850489 SGDID:S000001839 Length:558 Species:Saccharomyces cerevisiae


Alignment Length:483 Identity:96/483 - (19%)
Similarity:164/483 - (33%) Gaps:133/483 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LIVGTMIGSGIFVSPSGLLVRTGS----VGVSFIIWLACGVLSLLGALAYAELGTMNTSSGA--- 149
            |.:|.:||.|..|.....|.:.|.    :|.|.|..:|..|:..:|     |:.|:..|.|.   
Yeast    61 LALGGVIGPGCLVGAGNALNKGGPLALLLGFSIIGIIAFSVMESIG-----EMITLYPSGGGFTT 120

  Fly   150 -EWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAI 213
             ...:..||......:.:..|...||.           .:|...:.:.:...|:  |.:...:.|
Yeast   121 LARRFHSDALPAVCGYAYVVVFFAVLA-----------NEYNTLSSILQFWGPQ--VPLYGYILI 172

  Fly   214 VMILFVNCYSVNLGMAVQNVFTAA--KLVAVV-------VVICGGA----------WKLMQGNTQ 259
            ....|.....|.:|:..:..:..|  |:|.:|       |.|.|..          |    .:..
Yeast   173 FWFAFEIFQLVGVGLFGETEYWLAWLKIVGLVAYYIFSIVYISGDIRNRPAFGFHYW----NSPG 233

  Fly   260 HLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALI 324
            .||:.|.|       ||..|......|.|..::.....|.|||.|.:|.::...:..:.:.|..|
Yeast   234 ALSHGFKG-------IAIVFVFCSTFYSGTESVALAATESKNPGKAVPLAVRQTLWRILVVYIGI 291

  Fly   325 NISYLAA-------MSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLC 382
            .:.|.|.       :|....:....:|:..........|.|:...:.|:...:.||:|:...|..
Yeast   292 AVFYGATVPFDDPNLSASTKVLKSPIAIAISRAGWAGGAHLVNAFILITCISAINGSLYIGSRTL 356

  Fly   383 FAASREGHLLDILSYVHVRRLTPAPGL-IFHSL-IASAM----------------------VLHG 423
            ...:.||....||::.. ||..|.|.: :|::| :.|.|                      ::.|
Yeast   357 THLAHEGLAPKILAWTD-RRGVPIPAITVFNALGLISLMNVSVGAANAYSYIVNLSGVGVFIVWG 420

  Fly   424 TIDSLIDFFSFT------AWIFYGGAMLALIVMRYTKPNYPRPYKVPII--IPVVVLVISVYLVA 480
            .|       |:|      ||:..|.::..|            ||:....  .||:.|..:::|. 
Yeast   421 VI-------SYTHLRIRKAWVAQGRSIEEL------------PYEALFYPWTPVLSLAANIFLA- 465

  Fly   481 APIFETPRVEYLYALLFIFAGLIFYVPF 508
                             :..|..::|||
Yeast   466 -----------------LIQGWSYFVPF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 96/483 (20%)
AGP3NP_116600.1 2A0310 50..517 CDD:273334 96/483 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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