DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and CAT9

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_563754.1 Gene:CAT9 / 837104 AraportID:AT1G05940 Length:569 Species:Arabidopsis thaliana


Alignment Length:518 Identity:129/518 - (24%)
Similarity:201/518 - (38%) Gaps:149/518 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGT-M 143
            |.||||||..:.|.||..||:|:|| .:|.:.|....||: |.:|..|...:|.||.||||.: .
plant    48 LVRRLGLFDLILLGVGASIGAGVFV-VTGTVARDAGPGVT-ISFLLAGASCVLNALCYAELSSRF 110

  Fly   144 NTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPP-RGVV-- 205
            ....|..:.|...|:....|||. :|..::......|.|..|.|.|||.  :.|..|. :|.:  
plant   111 PAVVGGAYMYSYSAFNEITAFLV-FVQLMLDYHIGAASISRSLASYAVA--LLELFPALKGSIPL 172

  Fly   206 ---------------KMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQ 255
                           .::|.:.:.::..|.|..|....||.:|.||.|:|.|:||||.||:::..
plant   173 WMGSGKELLGGLLSLNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFEIDV 237

  Fly   256 GN-TQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLP----------RS 309
            .| :....|.|.       |:.|......::|.|::.:....||.|||.::||          .|
plant   238 ANWSPFAPNGFK-------AVLTGATVVFFSYVGFDAVANSAEESKNPQRDLPIGIMGSLLVCIS 295

  Fly   310 IIIGIPLVTLCYALINISYLAAMSPQEMIESEA-VAVTFGNR---------ILGALAWLMPLSVT 364
            :.||:.||           |..|.|..::..:| :|..|.::         .:||:|.|    .|
plant   296 LYIGVCLV-----------LTGMVPFSLLSEDAPLAEAFSSKGMKFVSILISIGAVAGL----TT 345

  Fly   365 ISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMV----LH--- 422
            ....|     |:...||.....|:|.|..|.|.:|....||....|:..::|..:.    :|   
plant   346 TLLVG-----LYVQSRLYLGLGRDGLLPSIFSRIHPTLHTPLHSQIWCGIVAGVLAGIFNVHSLS 405

  Fly   423 -----GTIDS-------------------------------------LIDFFSFTAWIFY----- 440
                 ||:..                                     :|....|.|.:||     
plant   406 HILSVGTLTGYSVVAACVVALRLNDKKDRESSNRWTSSWQEGVICLVIIACSGFGAGVFYRFSAS 470

  Fly   441 --------GGAMLALIVMRYTKPNYPRPYKVPI----------IIPVVVLVISVYLVAAPIFE 485
                    |.|::|..|:     :|.:.|.:|:          |:|.|.:..:::|.|...:|
plant   471 VIFILLSVGVAVVASAVL-----HYRQAYALPLGSGFSCPGVPIVPSVCIFFNIFLFAQLHYE 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 129/518 (25%)
CAT9NP_563754.1 2A0303 42..552 CDD:273330 129/518 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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