DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and Slc7a7

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_112631.1 Gene:Slc7a7 / 83509 RGDID:619902 Length:512 Species:Rattus norvegicus


Alignment Length:487 Identity:187/487 - (38%)
Similarity:292/487 - (59%) Gaps:20/487 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 EAPETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGS 115
            ||.|.|.|..|....|....       |.|::.:.|.:||.||||.||||||||||.|:|:.:.|
  Rat    14 EADEADGSAQGDGAGPAAEQ-------VKLKKEISLLNGVCLIVGNMIGSGIFVSPKGVLMYSAS 71

  Fly   116 VGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMA 180
            .|:|.:||...|:.|:.|||.||||||....|||.:||.::|:|...||:..|.|.|:::|:..|
  Rat    72 FGLSLVIWAVGGIFSVFGALCYAELGTTIKKSGASYAYILEAFGGFLAFIRLWTSLLIIEPTSQA 136

  Fly   181 IICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVV 245
            :|.::||.|.|:.....|..|....:::|...|.::.|:||..|..|..||::||.||::|::.|
  Rat   137 VIAITFANYMVQPLFPSCGAPYAAGRLLAAACICLLTFINCAYVKWGTLVQDIFTYAKVLALIAV 201

  Fly   246 ICGGAWKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSI 310
            |..|..:|.||.|.:..::|.|....:|.||.|.|:.|::|.||:.||||||||:||.:|||.||
  Rat   202 IIAGIVRLGQGATTNFEDSFEGSSFAMGDIALALYSALFSYSGWDTLNYVTEEIRNPERNLPLSI 266

  Fly   311 IIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTL 375
            .|.:|:||:.|.|.|::|.:.:..::::.|:||||||.::|.|...|.:||:|.:|.||..|.::
  Rat   267 GISMPIVTIIYLLTNVAYYSVLDIKDILASDAVAVTFADQIFGIFNWTIPLAVALSCFGGLNASI 331

  Fly   376 FAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFY 440
            .||.||.|..||||||.|.:..:||.|.||.|.|:|:.::|...:....|..||:::||:.|.|.
  Rat   332 VAASRLLFVGSREGHLPDAICMIHVERFTPVPSLLFNGILALVYLCVEDIFQLINYYSFSYWFFV 396

  Fly   441 GGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFY 505
            |.:::..:.:|:.:|:.|||.|:.:..|:|..:.:::|||.|:: :..:..|..:....:||.||
  Rat   397 GLSIVGQLYLRWKEPDRPRPLKLSLFFPIVFCLCTIFLVAVPLY-SDTINSLIGIGIALSGLPFY 460

  Fly   506 VPFVKLGMTP---------RFMNKVTLFFQLL 528
            ...:::   |         |.:...|.:.|::
  Rat   461 FLIIRV---PEHKRPLCLRRIVASTTRYLQII 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 185/485 (38%)
Slc7a7NP_112631.1 2A0308 24..496 CDD:273332 182/477 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100314
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X75
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.