DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and CAT3

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_198510.2 Gene:CAT3 / 833664 AraportID:AT5G36940 Length:609 Species:Arabidopsis thaliana


Alignment Length:446 Identity:109/446 - (24%)
Similarity:193/446 - (43%) Gaps:69/446 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GRMRKPLER------NGSTQNHVVH--LERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGS-- 115
            |.:|..:.|      ||..:.|..|  |.:.|.....:|:.||:.||:|:::. .|.:.|..|  
plant     2 GCLRSLVRRKQFDSSNGKAETHHHHQQLAKALTFPHLIAIGVGSTIGAGVYIL-VGTVAREHSGP 65

  Fly   116 -VGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWV---------S 170
             :.:||:|   .|:.:.|.|..||||.:...|:|:.:.|.....|...|:|..|.         |
plant    66 ALALSFLI---AGISAALSAFCYAELSSRFPSAGSAYHYSYICIGEGVAWLIGWALILEYTIGGS 127

  Fly   171 TLV--LKPSQMAII-----CLS--FAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNL 226
            |:.  :.|: :|:|     ||.  .|::.:.......||       .|.|.:.::..:.|..|..
plant   128 TVARGISPN-LAMIFGGEDCLPTILARHQIPGLDIVVDP-------CAAVLVFIVTGLCCLGVKE 184

  Fly   227 GMAVQNVFTAAKLVAVVVVICGGA-------WKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLW 284
            ....|.:.|.|.:..::.||..|:       |...:..|.:.....:|.:  .|: ||.|:    
plant   185 STFAQGIVTTANVFVMIFVIVAGSYLCFKTGWVGYELPTGYFPYGVDGML--TGS-ATVFF---- 242

  Fly   285 AYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLA-----AMSPQEMIESEAVA 344
            ||.|::.:..:.||:|||.::||..|.|.:.|..|.|.::::..:.     ||.|...|.|    
plant   243 AYIGFDTVASMAEEVKNPRRDLPLGIGISLLLCCLLYMMVSVVIVGLVPYYAMDPDTPISS---- 303

  Fly   345 VTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGL 409
             .|.:..:...|:|:.|...::...:..|::....|:..|.:|:|.|....|||:.|...|..|.
plant   304 -AFSSHGIQWAAYLINLGAVMALCSALMGSILPQPRILMAMARDGLLPSYFSYVNQRTQVPINGT 367

  Fly   410 IFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPI 465
            |...:.|:.:.....:..|....|....:.:....::|:::||..|    |.:||:
plant   368 ITTGVCAAILAFFMDVSQLAGMVSVGTLVAFTMVAISLLIVRYVVP----PDEVPL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 109/446 (24%)
CAT3NP_198510.2 2A0303 5..584 CDD:273330 108/443 (24%)

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