DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and AAT1

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_193844.2 Gene:AAT1 / 827860 AraportID:AT4G21120 Length:594 Species:Arabidopsis thaliana


Alignment Length:497 Identity:115/497 - (23%)
Similarity:198/497 - (39%) Gaps:86/497 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 VGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAY 158
            :|.:|||||||. :||..|..|.....:.::..||.::|....|.|.......:|..:||.....
plant    84 IGAVIGSGIFVL-TGLEARNHSGPAVVLSYVVSGVSAMLSVFCYTEFAVEIPVAGGSFAYLRVEL 147

  Fly   159 GPAPAFLF-----------------SWVS---TLV-LKPSQMAIICLSFAQ-YAVEAFVTECDPP 201
            |...||:.                 ||.|   ||: .||....||.....: |      :..|| 
plant   148 GDFMAFIAAGNIILEYVVGGAAVARSWTSYFATLLNHKPEDFRIIVHKLGEDY------SHLDP- 205

  Fly   202 RGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFT-AAKLVAVVVVICGGAWKLMQGNTQHLSNAF 265
                ..|.:.||:.:|.|      :|....:.|. .|.::.:||::    :.::.|.|:.....:
plant   206 ----IAVGVCAIICVLAV------VGTKGSSRFNYIASIIHMVVIL----FVIIAGFTKADVKNY 256

  Fly   266 NGPMP-NVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYL 329
            :...| .|..:..:.....:||.|::.::.:.||.|||.:::|..::..:.:.|:||.|:.:: |
plant   257 SDFTPYGVRGVFKSAAVLFFAYIGFDAVSTMAEETKNPGRDIPIGLVGSMVVTTVCYCLMAVT-L 320

  Fly   330 AAMSPQEMIESEA-VAVTFGNRILGALAWLMPLSVTISTFGSANG--TLFAAG-----RLCFAAS 386
            ..|.|.:.|:.:| .:|.|     .|:.|  ..:..|..||:..|  |:...|     |.....:
plant   321 CLMQPYQQIDPDAPFSVAF-----SAVGW--DWAKYIVAFGALKGMTTVLLVGAIGQARYMTHIA 378

  Fly   387 REGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGT-IDSLIDFFSFTAWIFYGGAMLALIVM 450
            |...:...|:.|:.:..||....:. .|.|:|::...| :..|.|..|.:....:....:||:|.
plant   379 RAHMMPPWLAQVNAKTGTPINATVV-MLAATALIAFFTKLKILADLLSVSTLFIFMFVAVALLVR 442

  Fly   451 RY--TKPNYPRPYKVPIIIPVVVLVISV---------------YLVAAPIFETPRVEYLYALLFI 498
            ||  |.....|.....::...::|..|.               |.:..||:....|...:.:...
plant   443 RYYVTGETSTRDRNKFLVFLGLILASSTATAVYWALEEEGWIGYCITVPIWFLSTVAMKFLVPQA 507

  Fly   499 FAGLIFYVPFVKLGMTPRFMNKVTLFFQLLLEVVPTSSMAMF 540
            .|..|:.||.|.  ..|.....:.:|   ||..:.|.|...|
plant   508 RAPKIWGVPLVP--WLPSASIAINIF---LLGSIDTKSFVRF 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 112/487 (23%)
AAT1NP_193844.2 2A0303 58..565 CDD:273330 115/497 (23%)

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