DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and slc7a6

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_005166451.1 Gene:slc7a6 / 57957 ZFINID:ZDB-GENE-000607-21 Length:494 Species:Danio rerio


Alignment Length:514 Identity:190/514 - (36%)
Similarity:302/514 - (58%) Gaps:42/514 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NSTDNNRGHNVPTKTTSNGTMCANGSLGTEGPEAPETDSSGTGRMRKPLERNGSTQNHVVHLERR 83
            |:||:.:               .||.     ||:|       ..:.||.|.        :.|::.
Zfish     3 NNTDSKK---------------MNGQ-----PESP-------AALSKPRES--------MQLKKE 32

  Fly    84 LGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSG 148
            :.|.:||:||||.||||||||||.|:|:.:.|.|:|.:||...|:.|::|||.||||||..|.||
Zfish    33 ISLLNGVSLIVGNMIGSGIFVSPKGVLIYSASYGLSLVIWAIGGIFSVVGALCYAELGTTITKSG 97

  Fly   149 AEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAI 213
            |.:||.::::|...||:..|.|.|:::|:..|:|.::||.|.|:.....|:||....:::|...|
Zfish    98 ASYAYILESFGGFIAFIRLWTSLLIIEPTSQAVIAITFANYLVQPLFPTCEPPYSASRLIAAACI 162

  Fly   214 VMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFNGPMPNVGAIATA 278
            .::.|:|...|..|..||:|||.||::|::|:|..|..||.||.|.:..::|.|...:.|.||.|
Zfish   163 CLLTFINSAYVKWGTRVQDVFTYAKVLALIVIIITGIVKLCQGFTINFEDSFQGSSRDPGGIALA 227

  Fly   279 FYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAV 343
            .|:.|::|.||:.||:||||||||.:|||.||.|.:|:||:.|.|.|::|.|.:....::.|:||
Zfish   228 LYSALFSYSGWDTLNFVTEEIKNPERNLPLSIAISMPIVTIIYILTNVAYYAVLDMSAILASDAV 292

  Fly   344 AVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPG 408
            ||||.:..||.::|.:|::|.:|.:|..|.::.||.||.|..:|||||.|.||.:|:.|.||.|.
Zfish   293 AVTFADHTLGVMSWTIPIAVALSCYGGLNSSIIAASRLFFVGAREGHLPDALSMIHIERFTPVPA 357

  Fly   409 LIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLV 473
            |:|:..:|...:....:..||:::||:.|.|.|.::...|.:|:.:|:.|||.|:.::.|::..:
Zfish   358 LLFNCAMALIYLTVEDVFQLINYYSFSYWFFVGLSIAGQIYLRWKEPDRPRPLKLSLVYPIIFCL 422

  Fly   474 ISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPFVKLGMTPR------FMNKVTLFFQ 526
            ..|:|||.|:: :..:..|..:....:|:..|...:.|..:.|      .::.:|.|.|
Zfish   423 CVVFLVAVPLY-SDTLNSLIGIAIALSGVPVYFLGIHLPESKRPPIITKLLSAITRFTQ 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 183/480 (38%)
slc7a6XP_005166451.1 2A0308 2..489 CDD:273332 190/514 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100314
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.760

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