DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and si:ch73-352p4.8

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_697137.2 Gene:si:ch73-352p4.8 / 568699 ZFINID:ZDB-GENE-140106-36 Length:492 Species:Danio rerio


Alignment Length:463 Identity:183/463 - (39%)
Similarity:281/463 - (60%) Gaps:3/463 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 STQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALA 136
            :.::..|||.||:||...::.|:||::|||||::|.|:|:.:||||:|.::|..|||||..|||.
Zfish    22 AVKDDAVHLRRRIGLLPAISFIIGTVVGSGIFIAPKGVLMNSGSVGLSLLVWALCGVLSTCGALC 86

  Fly   137 YAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPP 201
            ||||||..|.||..:.|.::..||.||||..|...:.::|:..:.:.|:|.:|.||.|...|..|
Zfish    87 YAELGTSFTKSGGHYTYLLETLGPLPAFLRLWTEYIFIRPAVASYVSLAFGRYVVEPFFMPCVAP 151

  Fly   202 RGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFN 266
            ..:||||:::.:..::.|||:||:|....|...|..|:.|:|::|..|...|..|||::..|||.
Zfish   152 TVLVKMVSMLGVTFVVAVNCWSVSLAARTQVSLTFIKMFALVLIIIPGIMALANGNTKNFQNAFE 216

  Fly   267 GPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAA 331
            ....::..:..|||:||:||.||..||::|||:.||::.:|.:||..:..||:.|.|:|::|...
Zfish   217 SDSVSLTKLPLAFYSGLYAYGGWFYLNFITEEVINPNRTVPLAIIFSMVTVTVFYVLVNVAYYTM 281

  Fly   332 MSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILS 396
            |:..|::.|:||||||.||.|..:|..:|:.|.:|..|:.||..|.:.|:.|..:|||||..|.|
Zfish   282 MTANELLVSDAVAVTFANRALQGVAPAIPVLVALSCLGALNGGFFGSPRMLFVGAREGHLPAIFS 346

  Fly   397 YVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPY 461
            .:|:||.||.|.::|...:...|:..|.|..||:|.||:.|:|...|.|.||:.||..|.:|||:
Zfish   347 MIHIRRQTPLPAVLFLYPLVIVMMARGEIFQLINFASFSRWLFIALATLGLIIHRYRFPEHPRPF 411

  Fly   462 KVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPFVKLGMTPRF---MNKVTL 523
            ||||.:.||..::..::|...::..|........|.|....::|:...|..:..|:   .|.|:.
Zfish   412 KVPIAVAVVFTIVCFFIVGLSLYSDPWNTGGSCALTISGVPVYYLTVKKSCIPERWKKAFNYVSE 476

  Fly   524 FFQLLLEV 531
            ..|:||||
Zfish   477 KLQILLEV 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 183/463 (40%)
si:ch73-352p4.8XP_697137.2 2A0308 27..488 CDD:273332 183/458 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.830

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