DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and slc7a14a

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001334618.1 Gene:slc7a14a / 566270 ZFINID:ZDB-GENE-070912-112 Length:785 Species:Danio rerio


Alignment Length:433 Identity:113/433 - (26%)
Similarity:191/433 - (44%) Gaps:76/433 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KP----LERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRT---GSVGVSFII 122
            ||    ||.:|.|..|...|.|.|.....|:|.||:.:|:|::| .|||:.:.   ..|.|||||
Zfish    30 KPVESMLETSGGTGAHGTKLARVLSTVDLVSLGVGSCVGTGMYV-VSGLVAKEMAGPGVIVSFII 93

  Fly   123 WLACGVLSLLGALAYAELGT-MNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLK--------PSQ 178
               ..|.|:|..:.|||.|. :..::|:.:.|.....|...||...|  .|:|:        .|.
Zfish    94 ---AAVASILSGVCYAEFGVRVPKTTGSAYTYSYVTVGEFVAFFIGW--NLILEYLIGTAAGASA 153

  Fly   179 MAIICLSFAQYAVEAF-VTECDPPRGVVK-------MVALVAIVMILFVNCYSVNLGMAVQNVFT 235
            ::.:..|.|.:::..| :.......|:.|       ::|||..:::..:....|...:...||..
Zfish   154 LSSMFDSLANHSISGFMINHIGTLNGLGKGEQSYPDILALVIGILVTVIVALGVKNSVGFNNVLN 218

  Fly   236 AAKLVAVVVVICGGAWKLMQGN---TQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTE 297
            ...||..|.::..|.:.:...|   .:.|...::|.|.  || ||.||    |:.|::.:....|
Zfish   219 VINLVVWVFIMIAGLFFVSGSNWDEGRFLPYGWSGVMQ--GA-ATCFY----AFIGFDIIATTGE 276

  Fly   298 EIKNPSKNLPRSIIIGIPLVTLCYALINIS-YLAAMSPQEMIESEA-----------------VA 344
            |.|:|:.::|.:|...  |||...|.:::| .|..|.|...|:|:|                 ||
Zfish   277 EAKSPNTSIPYAITAS--LVTCLTAYVSVSVILTLMVPYTEIDSDAPLMEMFSLHGFQTAKYIVA 339

  Fly   345 VTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGL 409
            :       |::|.|     |:|..||    ||...|:.:|.:.:|.|...|::|.....|||...
Zfish   340 I-------GSIAGL-----TVSLLGS----LFPMPRVIYAMAGDGLLFRFLAHVSTYTETPAVAC 388

  Fly   410 IFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRY 452
            :....:::.:.|..::..||:..|....:.|....:.::::||
Zfish   389 VVSGFLSALLALLVSLRDLIEMMSIGTLLAYTLVSVCVLLLRY 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 113/433 (26%)
slc7a14aNP_001334618.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..785
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.040

Return to query results.
Submit another query.