DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and slc7a1a

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_021327949.1 Gene:slc7a1a / 559627 ZFINID:ZDB-GENE-091116-69 Length:651 Species:Danio rerio


Alignment Length:433 Identity:97/433 - (22%)
Similarity:182/433 - (42%) Gaps:64/433 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMN 144
            |.|.|..|..|||.||:.:|:|::|. :|.:.|..:.....:.:|...:.|:|..|.|||.|...
Zfish    28 LSRCLNTFDLVALGVGSTLGAGVYVL-AGAVARENAGPAIVLSFLIAALASVLAGLCYAEFGARV 91

  Fly   145 TSSGAEWAYFMDAYGPAPAFLFSW--VSTLVLKPSQMA-IICLSFAQYA---VEAFVTE---CDP 200
            ..:|:.:.|.....|...||:..|  :.:.|:..|.:| ....:|.:..   :|.|..:   .:.
Zfish    92 PKTGSAYLYSYVTVGELWAFITGWNLILSYVIGTSSVARAWSATFDELIGKHIEHFCRQYMSMNA 156

  Fly   201 PRGVVKMVALVAIVMILFVN---CYSVNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQ--H 260
            |..:.:...:.::.:||.:.   .:.|.....|..|||...::.::.::..|   |::|..:  |
Zfish   157 PGVLAEYPDMFSVFIILTLTGLLAFGVKESAMVNKVFTCINILVLLFMVVSG---LVKGTLKNWH 218

  Fly   261 LS-----NAFNG------PMPN-----------------VGAIATAFYTGLWAYDGWNNLNYVTE 297
            |.     ||.|.      |:|:                 :...||.||    |:.|::.:....|
Zfish   219 LDPDEILNATNSTLNATQPLPSEEMLGQGGFMPFGFTGVLSGAATCFY----AFVGFDCIATTGE 279

  Fly   298 EIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEA-VAVTF------GNRILGAL 355
            |:|||.:.:|..|:..:.:..:.|..::.: |..|.|..|::..: :.|.|      |.....|:
Zfish   280 EVKNPQRAIPIGIVSSLLICFVAYFGVSAA-LTMMMPYYMLDKNSPLPVAFKYVGWEGATYAVAV 343

  Fly   356 AWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMV 420
            ..|..||.::.      |.:|...|:.:|.:.:|.|...::.:..|..||....|....:|:.|.
Zfish   344 GSLCALSTSLL------GAMFPMPRVLWAMADDGLLFKFMAGISERTKTPIKATIMSGFLAAIMA 402

  Fly   421 LHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKV 463
            ....:..|:|..|....:.|......::|:||....:.:.|.:
Zfish   403 FLFDLKDLVDLMSIGTLLAYTLVAACVLVLRYQPEQFSQTYHI 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 97/433 (22%)
slc7a1aXP_021327949.1 2A0303 4..603 CDD:273330 97/433 (22%)

Return to query results.
Submit another query.