DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and CG1607

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001263139.1 Gene:CG1607 / 43707 FlyBaseID:FBgn0039844 Length:507 Species:Drosophila melanogaster


Alignment Length:525 Identity:192/525 - (36%)
Similarity:314/525 - (59%) Gaps:38/525 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKNACKNNSTDNNRGHNVPTKTTSNGTMCANGSLGTEGPEAPETDSSGTGRMRKPLERNGSTQNH 76
            :||:.:.:|..|..|......|..:|                  |..|.|        .|.    
  Fly     8 RKNSSRKSSIVNGNGDASAKLTNGDG------------------DGGGDG--------GGE---- 42

  Fly    77 VVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELG 141
             |.|:.::.|.:|..:|||::|||||||||:|:|:.||||.::.|:|:..|:.|::||..|||||
  Fly    43 -VTLKAKMSLLNGCTVIVGSIIGSGIFVSPTGVLMYTGSVNLALIVWVISGLFSMVGAYCYAELG 106

  Fly   142 TMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVK 206
            ||.|.|||::||.|:.:||..||:..|:..::::|...||:.|:|:.|.::.|..||.||....:
  Fly   107 TMITKSGADYAYIMETFGPFMAFIRLWIECMIVRPCSQAIVALTFSTYVLKPFFPECTPPEDSAR 171

  Fly   207 MVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFNGPMPN 271
            ::|:..|:::..:||:.|....|||::||.|||:|:.::|..|.::|..||||:.:  |......
  Fly   172 LLAVCCILVLTLINCWDVKWATAVQDIFTYAKLLALFIIIATGVYQLYLGNTQYFT--FENTDTK 234

  Fly   272 VGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQE 336
            |.:||.:||:||:||:|||.||::.||:|:|.|||||:|.|...|||:.|.:.|:|:...:||.|
  Fly   235 VTSIALSFYSGLFAYNGWNYLNFIIEELKDPVKNLPRAIAISCTLVTIVYVMANVSFYTILSPDE 299

  Fly   337 MIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVR 401
            ::.|.|||||:..|..|.|||.:|:.|.:||||:.||.|..:.||.:|.:..|.:.:||:.:.::
  Fly   300 VMGSSAVAVTYAERAFGMLAWTIPVFVALSTFGAVNGILLTSSRLFYAGANNGQMPEILTMIQIQ 364

  Fly   402 RLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPII 466
            |.||.|.::..:|::...:....|.:||::..|..|:..|.|:|.|..:|:.:||.|||.:||::
  Fly   365 RFTPTPAVLAMALLSMLYLTVSDIFALINYVGFATWLSIGVAVLCLPWLRWAQPNLPRPIRVPMV 429

  Fly   467 IPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPFVKLGMTPRFMNK----VTLFFQL 527
            .|:|.|:.::::...|::.:| ||..|.:|.|.:.:..|:.|:.....|.:..|    :|.|.|.
  Fly   430 FPIVYLIATIFVTVVPMYASP-VETGYGILMILSSIPVYLVFIAWKNKPIWFQKTMVSLTRFLQK 493

  Fly   528 LLEVV 532
            :|.|:
  Fly   494 MLMVL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 184/482 (38%)
CG1607NP_001263139.1 2A0308 42..501 CDD:273332 181/465 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466558
Domainoid 1 1.000 128 1.000 Domainoid score I255
eggNOG 1 0.900 - - E2759_KOG1287
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I235
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 1 1.000 - - mtm9156
orthoMCL 1 0.900 - - OOG6_100314
Panther 1 1.100 - - P PTHR11785
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
1110.820

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