DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and gb

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001287555.1 Gene:gb / 43265 FlyBaseID:FBgn0039487 Length:517 Species:Drosophila melanogaster


Alignment Length:504 Identity:184/504 - (36%)
Similarity:291/504 - (57%) Gaps:32/504 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PTKTTSNGTMCANGSLGTEGPEAPETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIV 94
            |....:....|..||        .|:|||.                  |.::::|||..|||:|:
  Fly    31 PAANPAEKAQCREGS--------AESDSSR------------------VVIKKQLGLLEGVAIIL 69

  Fly    95 GTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYG 159
            |.:.||||||||.|::....|||.|.:||:.||:||::|||.||||||....||.::||..:|||
  Fly    70 GIIFGSGIFVSPKGVIREVESVGASLVIWVLCGLLSMIGALCYAELGTAIPKSGGDYAYIFEAYG 134

  Fly   160 PAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFV-TECDPPRGVVKMVALVAIVMILFVNCYS 223
            ..||||:.|.:.::..|:..||:.|:||.|.:|.|. ..|:.|:..::::|.:.|..:.::|.|.
  Fly   135 SLPAFLYLWDAMMIFVPTTNAIMGLTFASYVLEPFFGGACEIPKIALQLLAAITICFLTYLNSYY 199

  Fly   224 VNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLWAYDG 288
            :.:...:|||....|:.|:|::|..|...:|.||.::.:..|:....:.|.::.|||:|:::|.|
  Fly   200 MKVTTKMQNVIMFTKIAALVLIILVGLVWMMMGNVENFTRPFDNTETDPGKMSVAFYSGIFSYAG 264

  Fly   289 WNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILG 353
            ||.||::|||:::|.:||||:|.|.:||||..|.|.|::|||.:||.|||.|.|:|||||::|||
  Fly   265 WNYLNFMTEELRDPYRNLPRAIYISLPLVTGIYVLANVAYLAVLSPSEMIASNAIAVTFGDKILG 329

  Fly   354 ALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASA 418
            ..:.::||.|.||.||..:..:..:.|:||..:|.||:..|||::.|:..||.|.|:|...::..
  Fly   330 VFSLIIPLMVAISAFGGLSVHIMTSSRICFVGARNGHMPAILSHISVKSYTPLPSLVFLCFLSIV 394

  Fly   419 MVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPI 483
            |::...:..||.:.|.....|...::.|::..|||:|...||.||.:.||.:.:::..:||..||
  Fly   395 MLVVSDVYVLITYASIVESFFIMLSVSAVLYFRYTRPCMERPIKVAMWIPALFVIVCAFLVVVPI 459

  Fly   484 FETPRVEYLYALLFIFAGLIFYVPFVKLGMTPRF----MNKVTLFFQLL 528
            :..| .|....:|....|:.||...|.....|::    ::.||...|.|
  Fly   460 YVAP-YEVGMGVLITIIGIPFYYVGVVWKNKPKWVQSTIDSVTFTCQKL 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 180/481 (37%)
gbNP_001287555.1 2A0308 32..515 CDD:273332 183/503 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I255
eggNOG 1 0.900 - - E2759_KOG1287
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I235
Isobase 1 0.950 - 0 Normalized mean entropy S1752
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 1 1.000 - - mtm9156
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11785
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X75
109.920

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