DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and CG7255

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001034016.1 Gene:CG7255 / 39662 FlyBaseID:FBgn0036493 Length:1063 Species:Drosophila melanogaster


Alignment Length:571 Identity:121/571 - (21%)
Similarity:218/571 - (38%) Gaps:127/571 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 RKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRT---GSVGVSFIIWLA 125
            ||.|:.:||...  ..|.|.|||:...||.||:.:|:|::|. :|.:.:.   .||.:||.|   
  Fly    14 RKNLQADGSEGE--TKLNRVLGLWDLTALGVGSTLGAGVYVL-AGQIAKDQAGPSVMISFAI--- 72

  Fly   126 CGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLK-PSQMAIICLSFAQY 189
            ..:.|||..:.|||.|.....:|:.:.|.....|...||:..|  .|:|: ....|.:|...:.|
  Fly    73 AALASLLAGVCYAEFGARVPKAGSAYVYSYVCIGEFVAFVIGW--NLILEYVIGTASVCRGISLY 135

  Fly   190 AVEAFVTECDPPRGVVKMV-ALVAIVMILFVNCY------------SVNLGMAVQ------NVFT 235
             :::.:.:      .:|.. |.||.:.:.|:..|            .|.|...|:      |..|
  Fly   136 -LDSLLND------TLKYTFAEVAPMNVSFLGSYFDFLAFGLVVVFGVALAFGVETSTMANNFVT 193

  Fly   236 AAKLVAVVVVICGGA-------WKLMQGNTQHLSNAFNG---PMPNVGAI---ATAFYTGLWAYD 287
            ...:..:..||..||       |.:........|...:|   |....|.:   ||.|:    .:.
  Fly   194 CLNIFILGFVIIAGALKADYSNWTVDPSTVSANSTIGSGGFFPFGFEGTLRGAATCFF----GFV 254

  Fly   288 GWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRIL 352
            |::.:....||::||.||:|:||::.:.::.|||..:: :.|..|.|. .|:.....:.:....:
  Fly   255 GFDCIATTGEEVRNPRKNIPKSILLSLLIIFLCYFGVS-TVLTLMLPY-YIQDVNAPLPYAFEYV 317

  Fly   353 G--ALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLI 415
            |  ...|::.:...:....|..|.||...|:.::.:::|.|...|..|..|...|..|.|..:|.
  Fly   318 GWPVAMWIVTVGGLVGLLASLFGALFPLPRVMYSMAQDGLLFKFLGKVSPRFRVPVTGSIVAALF 382

  Fly   416 ASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRY---------------------------- 452
            .:|:.....:..|:...|....:.|....::::::||                            
  Fly   383 TAAIAGLFDLSQLVSLLSIGTLLAYSVVAISIMLLRYMDYCEVDENPGQREVRASETTSLTSSSE 447

  Fly   453 -----------------TKPNYPRPYKVPIIIPVVVLV---ISVYLVAAPIFETPRVEYLYALLF 497
                             .:||......|.::..:..|:   |.|.::.|.:....:..:...||.
  Fly   448 RFTFGSVCTQLFNVHRVQEPNAISSRIVGVLSTLFCLISLGIGVLIMQAHLLIASKEVWALTLLI 512

  Fly   498 IFAGL------------------IFYVPFVKLGMTPRFMNKVTLFFQLLLE 530
            :...|                  :|.||||.:  .|.....:.::..|.|:
  Fly   513 VLVVLMLLVICLICLQPREARRRLFRVPFVPI--VPAISIFINIYLMLQLD 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 121/571 (21%)
CG7255NP_001034016.1 2A0303 9..581 CDD:273330 121/571 (21%)
AA_permease_C 537..580 CDD:290617 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466570
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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