DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and tadr

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_724308.2 Gene:tadr / 35370 FlyBaseID:FBgn0032911 Length:719 Species:Drosophila melanogaster


Alignment Length:462 Identity:100/462 - (21%)
Similarity:167/462 - (36%) Gaps:142/462 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 IFVSPSGLLVRTGSVGVSFII--------WLACGVL--SLLGALAYAELGTMNTSSGAEWAYFMD 156
            :..|.||..:..|:..:|::|        .|..||:  ::.||:| |...|...|....:....:
  Fly     9 VLCSGSGARLALGASVISYLIVYNEASAPSLLVGVVLATVYGAMA-ARCKTSLRSLQMPYVRATN 72

  Fly   157 AYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNC 221
            .:..:..||..|:..|       |.:|   |..|:...::.|     :..|...:|.::||..|.
  Fly    73 KFDFSCLFLAIWLDAL-------ATVC---ACAALARTLSAC-----LDAMTGGLARILILGRNA 122

  Fly   222 -----YSVNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFN-----GPMPNVGAIA 276
                 :...||            |:||.::.|   ..|.| .:| |.||:     | |..:.||.
  Fly   123 PANEPWPDVLG------------VSVVFLVTG---MFMLG-LEH-SRAFSLILTLG-MFGLNAIL 169

  Fly   277 TAFYTGLWAYD--GWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIE 339
            :|  .|.|..|  .|:..:|...:              ||..|.|..||:..|:.... ||::  
  Fly   170 SA--VGWWRGDMLAWSADSYFQPD--------------GISSVFLGTALLTYSFPGDW-PQQL-- 215

  Fly   340 SEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAA-----SREGH----LLDIL 395
                   .|.|....|     ::..:||     ..|..|  :|.:.     |:|.:    |.:||
  Fly   216 -------RGGRFTATL-----ITGLVST-----SLLLTA--ICLSTVVHYRSQEDYVAVPLFNIL 261

  Fly   396 SYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRP 460
            ......:|.||         ::.|:|..:..:.::.|.    ..||      ||:|.....: |.
  Fly   262 DENGFHKLVPA---------SACMLLLTSSAAFLELFP----ELYG------IVVRLATSEW-RI 306

  Fly   461 YKVPIII-------PVVVLVISVYLVAAPIFETPRVEYLYAL-------LFIFAGLIFYVPFVKL 511
            ....|..       ||:.:.|:..:.|...|..|.....|.|       :|:.|..:.|:|:   
  Fly   307 LSKQISYESSESGNPVLAVFIAGSMCAMLAFACPLQHLSYTLAAGHMGGVFLRALYLLYIPY--- 368

  Fly   512 GMTPRFM 518
              .|::|
  Fly   369 --RPKYM 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 100/462 (22%)
tadrNP_724308.2 2A0303 5..>209 CDD:273330 58/249 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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