DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and JhI-21

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001245996.1 Gene:JhI-21 / 34624 FlyBaseID:FBgn0028425 Length:500 Species:Drosophila melanogaster


Alignment Length:489 Identity:200/489 - (40%)
Similarity:303/489 - (61%) Gaps:24/489 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ANG---SL--GTEGPEAPETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGS 100
            |||   ||  .|.|..||...:...|..:             :.|:|:|.|.:|||:||||:|||
  Fly     6 ANGVTTSLVEPTNGCAAPGNPNPADGEEK-------------IVLKRKLTLINGVAIIVGTIIGS 57

  Fly   101 GIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFL 165
            |||::|:|:.:.|.|||.|.:|||.||:||.:|||.||||||..|.||.::||.:.::||...||
  Fly    58 GIFIAPTGVFIYTESVGSSLLIWLTCGILSTIGALCYAELGTCITRSGGDYAYLLVSFGPLVGFL 122

  Fly   166 FSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAV 230
            ..|::.|:::|:...|:.||||.|||:.|..|||||:..||::|.:.:.::..:||.||.:.|.|
  Fly   123 RLWIALLIIRPTTQTIVALSFAHYAVKPFFPECDPPQNAVKLLAAICLTLLTTINCLSVKVSMKV 187

  Fly   231 QNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFNG--PMPNVGAIATAFYTGLWAYDGWNNLN 293
            |:|||..||:|::::|..|.:.:..|..::..|.:.|  ...|:|   .|||:||:|:.|||.||
  Fly   188 QDVFTVGKLLALIMIILSGLYYMATGELENFRNPWEGIYTARNIG---YAFYSGLFAFGGWNYLN 249

  Fly   294 YVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWL 358
            :||||:::|.|||||:|.|.:||||..|.|:|::|.|.::..||:.|.|||||||||:.|.||::
  Fly   250 FVTEELQDPYKNLPRAIWIAMPLVTSIYVLVNLAYFAVVNKPEMLSSLAVAVTFGNRVFGPLAFM 314

  Fly   359 MPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHG 423
            :|:.|.:||||..||.||.:.||....::||||.......||::.||.|.|||..|::..|:|..
  Fly   315 VPIFVALSTFGGVNGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTPIPSLIFTCLMSLLMLLTD 379

  Fly   424 TIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPR 488
            .:..||::||...|:....::..::.:|:.:|:.|||.||.:.:|:..:|..|.||..|..|.|:
  Fly   380 NVYQLINYFSSVLWLSVVASIAGMLWLRHKRPDLPRPIKVHLALPITFMVSCVTLVLLPNLEEPQ 444

  Fly   489 VEYLYALLFIFAGLIFYVPFVKLGMTPRFMNKVT 522
             ..|..:....||:.||..|:.....|:...:::
  Fly   445 -NLLIGIGITLAGIPFYYAFIARKKKPKCYGRLS 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 192/472 (41%)
JhI-21NP_001245996.1 AA_permease_2 27..494 CDD:330980 191/468 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I255
eggNOG 1 0.900 - - E2759_KOG1287
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I235
Isobase 1 0.950 - 0 Normalized mean entropy S1752
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 1 1.000 - - mtm9156
orthoMCL 1 0.900 - - OOG6_100314
Panther 1 1.100 - - P PTHR11785
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
1211.850

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