DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and Slc7a6

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_006531198.1 Gene:Slc7a6 / 330836 MGIID:2142598 Length:532 Species:Mus musculus


Alignment Length:497 Identity:194/497 - (39%)
Similarity:300/497 - (60%) Gaps:24/497 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SLGTEGPEAPETDSSGT----------GRMRKPLERNGSTQN---HVVHLERRLGLFSGVALIVG 95
            |.|.:.|...|....|:          .......|..||...   ..:.|::.:.|.:||:|:||
Mouse     9 STGVQEPFTMEAQELGSPTPTYHLLPKANQHTVKEDAGSPSQGSPETMQLKKEISLLNGVSLVVG 73

  Fly    96 TMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGP 160
            .||||||||||.|:|..|.|.|:|.|:|...|:.|::|||.||||||..|.|||.:||.::|:|.
Mouse    74 NMIGSGIFVSPKGVLKYTASYGLSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFGG 138

  Fly   161 APAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVN 225
            ..||:..|||.|:::|:..|||.::||.|.::.....||||....:::|...:.::.||||..|.
Mouse   139 FIAFIRLWVSLLIVEPTSQAIIAITFANYIIKPSFPTCDPPYVACRLLAAACVCLLTFVNCAYVK 203

  Fly   226 LGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWN 290
            .|..||:.||.||::|::.:|..|..||.||:|:|..:||.|...|||.::.|.|:.|::|.||:
Mouse   204 WGTRVQDTFTYAKVLALIAIIIMGLVKLCQGHTEHFQDAFKGSSWNVGDLSLALYSALFSYSGWD 268

  Fly   291 NLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGAL 355
            .||:||||||||.:|||.:|.|.:|:|||.|.|.|::|...::.|::.:|:||||||.::..|..
Mouse   269 TLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIQDVHKSDAVAVTFADQTFGMF 333

  Fly   356 AWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMV 420
            :|.:|::|.:|.||..|.::||:.||.|..||||||.::||.:|:.|.||.|.|:|:..:....:
Mouse   334 SWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIERFTPVPALLFNCTMTLIYL 398

  Fly   421 LHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFE 485
            :...:..||::|||:.|.|.|.:::..:.:|:.:|::|||.|:.:..|:|..|.|::|||.|:| 
Mouse   399 VVKDVFLLINYFSFSYWFFVGLSVVGQLYLRWKEPDWPRPLKLSLFFPIVFCVCSLFLVAVPLF- 462

  Fly   486 TPRVEYLYALLFIFAGLIFYVPFVKLGM------TPRFMNKV 521
            :..:..|..:....:|    ||...||:      .|.|:..|
Mouse   463 SDTINSLIGIGIALSG----VPVYFLGVYLPESRRPLFIRNV 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 191/488 (39%)
Slc7a6XP_006531198.1 2A0308 34..518 CDD:273332 189/472 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100314
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.760

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