DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and Slc7a3

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_058913.1 Gene:Slc7a3 / 29485 RGDID:68342 Length:619 Species:Rattus norvegicus


Alignment Length:433 Identity:107/433 - (24%)
Similarity:180/433 - (41%) Gaps:62/433 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 RKPLERN-GSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFII-WLAC 126
            |:.||.. |.|:     |.|.|.....|||.||:.:|:|::|....  |.....|.|.:| :|..
  Rat    16 RRLLELGMGETR-----LARCLSTLDLVALGVGSTLGAGVYVLAGE--VAKEKAGPSIVICFLVA 73

  Fly   127 GVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSW--VSTLVLKPSQMAIICLSFAQY 189
            .:.|:|..|.|||.|.....||:.:.|.....|...||...|  :.:.|:..:.:|....|....
  Rat    74 ALSSVLAGLCYAEFGARVPGSGSAYLYSYVTVGELWAFTTGWNLILSYVIGTASVARAWSSAFDN 138

  Fly   190 AVEAFVTE-------CDPPRGVVKMVALVAIVMILFVN---CYSVNLGMAVQNVFTAAKLVAVVV 244
            .:...:::       .:.|..:.:.....|:.::|.:.   ....|....|..|||...|:.:..
  Rat   139 LIGNHISQTLKGTILLNMPHVLAEYPDFFALALVLLLTGLLVLGANESGLVTKVFTGMNLLVLGF 203

  Fly   245 VICGG-------AWKLMQGN---TQHLSN--------AFNGPMP-----NVGAIATAFYTGLWAY 286
            ||..|       .|||.:.:   |...||        ...|.||     .:...||.||    |:
  Rat   204 VIISGFIKGELRNWKLTKEDYCLTMSESNGTCSLDSMGSGGFMPFGLEGILRGAATCFY----AF 264

  Fly   287 DGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEA---VAVTFG 348
            .|::.:....||.:||.:::|..|:|.:.:..|.|..:: |.|..|.|...::.|:   .|.|:.
  Rat   265 VGFDCIATTGEEAQNPQRSIPMGIVISLSICFLAYFGVS-SALTLMMPYYKLQPESPLPEAFTYV 328

  Fly   349 N----RILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGL 409
            .    |.|.|:..|..||.::.      |::|...|:.:|.:.:|.|..:|:.||....||....
  Rat   329 GWEPARYLVAIGSLCALSTSLL------GSMFPMPRVIYAMAEDGLLFRVLARVHNGTHTPIVAT 387

  Fly   410 IFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRY 452
            :...:||:.|.....:..|:|..|....:.|....:.::::||
  Rat   388 VVSGVIAAFMAFLFELTDLVDLMSIGTLLAYSLVSICVLILRY 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 107/433 (25%)
Slc7a3NP_058913.1 2A0303 4..591 CDD:273330 107/433 (25%)
AA_permease_C <551..589 CDD:290617
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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