DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and LOC292543

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_006228084.2 Gene:LOC292543 / 292543 RGDID:1565097 Length:681 Species:Rattus norvegicus


Alignment Length:519 Identity:115/519 - (22%)
Similarity:201/519 - (38%) Gaps:103/519 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 RKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFII-WLACG 127
            |:||..:..:::   .|.|.|.....|:|.||:.:|:|::|. :|.:.|. ..|.|.|| :|...
  Rat    65 RRPLAASEQSES---SLSRCLTTLDLVSLGVGSTLGAGVYVL-AGEVARE-KAGPSIIICFLIAA 124

  Fly   128 VLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSW--VSTLVLKPSQMA---------I 181
            :.|::..|.|||.|.....||:.:.|.....|...||:..|  :...|:..:.:|         :
  Rat   125 LSSVMSGLCYAEFGARVPCSGSAYLYSYVTVGQLLAFITGWNLILNYVIGAASVARAWSAAFDGL 189

  Fly   182 ICLSFAQYAVEAFVTECDPPRGVVK---MVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVV 243
            |....:|.....|..:.  |..:.|   ..||..::::..:..........|..|||...|:.:.
  Rat   190 IGNHISQALQTTFPIQV--PSFLAKYPDFFALGLVIVLTGILALGARESAMVTRVFTGVNLLVLC 252

  Fly   244 VVICGG-------AWKLMQGNTQHLSNAFN-----GPMPNVG-----------AIATAFYTGLWA 285
            .|...|       .|:|.:.:.:...:..|     ||:.:.|           ..||.|:    |
  Rat   253 FVSLSGFINGKLHNWQLTEDDYKLALSETNSTDSLGPLGSGGFMPFGLTGILRGTATCFF----A 313

  Fly   286 YDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEA------VA 344
            :.|::.:....||.:.|.:::|..|:|.:.:..|.|..:: |.|..|.|...|...:      :.
  Rat   314 FIGFDCIASTGEEARCPQRSIPLGIVISLFICFLMYFGVS-SALTLMMPYYQININSPLPQAFIH 377

  Fly   345 VTFG-NRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPG 408
            |.:| .|...|:..|..||      .|..|::|...|:.::.:.:|.|...|:.||.|..||...
  Rat   378 VGWGPARYAVAVGTLCALS------SSLIGSIFPVPRVVYSMAEDGLLFRKLAQVHPRTHTPVLA 436

  Fly   409 LIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRY--------------------- 452
            .:...:||:.|.....:..|:|..|....:.|.....:::|:||                     
  Rat   437 TVLCGVIAAFMAFLVELSDLVDLSSIGTLLAYSLVAFSVLVLRYQPDQNLSSCKKEKSDSMAVEL 501

  Fly   453 ---------TKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEY----LYALLFIFAGLI 503
                     .:|..|..      .|.:...:.:.:...|...:.|:.|    |.|||.:|..||
  Rat   502 EPGLELSSCMEPMSPEG------TPGIARGLCMPMDTTPTLRSGRIVYGCASLLALLLVFLCLI 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 115/519 (22%)
LOC292543XP_006228084.2 2A0303 53..656 CDD:273330 115/519 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351247
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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