DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and thi9

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_593353.1 Gene:thi9 / 2543578 PomBaseID:SPAC9.10 Length:591 Species:Schizosaccharomyces pombe


Alignment Length:613 Identity:117/613 - (19%)
Similarity:219/613 - (35%) Gaps:167/613 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NGSLGTEGPEAPETDSSGTGRMRKPLE--------------------------RNGSTQNHVVH- 79
            :..:..:.||..:| |||:..:::..|                          .:....|.::. 
pombe     3 SSQISHQDPELGQT-SSGSSSIKEKAEPQLYAGPIDPARRPDVFQEGFEDVSVTDDDNDNELLRK 66

  Fly    80 ------LERRLGLFSGVALIVGTM-IGSGIFVSPSGLLVRTGSVGVSF----IIW---LACGVLS 130
                  |.|....|...|....:: :.||:.:        |.|.|:||    ..|   |..|..|
pombe    67 MGYQPVLHRSFEFFESFAASFASLDVVSGVRL--------TFSWGISFGGPAAYWSAMLVTGFCS 123

  Fly   131 LLGALAYAELGTMNTSSGAEWAYFMDAYGPA----PAFLFSWVSTLVLKPSQMAIICLSFAQYAV 191
            ::.|...||:.:...::|:.:.:..::.||.    .:||.:|.||... .:.:|.|..|.|.: :
pombe   124 IVTAACLAEICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWWSTTAW-TTFVASITQSTANF-I 186

  Fly   192 EAFVTECDPP----------RGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVI 246
            .|.|:..:.|          |.|..:||.|.:|..:.:|......   .:.:|.|:.|:..:..:
pombe   187 FAEVSTFNNPWPTNDSDVKFRAVQWIVAEVLLVFTILLNQVPPRY---YKWIFKASMLLMFIDYV 248

  Fly   247 CGGAWKLM-----------------------QGNTQHLSNAFNGPMPNVGAI-------ATAFYT 281
            ....|..:                       .|..:.:.:|...|:.::..|       ..:::.
pombe   249 MNIIWVPVATSKKPDGFRSAKWVFTETIYDQAGYIKEVDDANGNPIASLSKIVPKGWQWCLSYFA 313

  Fly   282 GLWAYDGWNNLNYVTEEIKNPSKNLPR--------SIIIGIPLVTL-CYALINISYLAAM----- 332
            ......|::...::.||.|:.|....|        |.|:...|..| .:...::....|:     
pombe   314 TAGVIVGYDASGHIAEETKDASIKAARGIFYSTVTSFIVAFSLAILYLFCCPDLDTFTAILYNDN 378

  Fly   333 SPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSY 397
            |||..:...:..:..|..:      :|.:.:.:..|.:...::.|..||.||.||:| :|...::
pombe   379 SPQPFVNFYSYLLGRGGHV------VMNVVIILEIFLNGVVSVLACSRLVFAVSRDG-VLPFSNW 436

  Fly   398 VHVRRLTPAP-GLIFHSLIASAMVLHGTIDSLIDFFSFT----AWIFYGGAMLALIVMRYTKPNY 457
            :.....|..| ..|....|.||::|...:.|.:.|.|..    |..|...|:||...:..|:..:
pombe   437 ISQVSKTGQPKNAITVIYIVSALLLCTILPSAVAFTSLVSAAGAPSFAAYAVLAFCRLFITRDKF 501

  Fly   458 PRP-------YKVPIIIPVV----VLVISV----YLVAAPIFETPRVEYLYALLFIFAGLIFYVP 507
            |:.       .|..::|.:|    .||::|    |.|..|.|.       ||::           
pombe   502 PKGRWSLGWLSKPCLVITLVYNLFALVVNVSPYTYPVTGPSFN-------YAVV----------- 548

  Fly   508 FVKLGMTPRFMNKVTLFFQLLLEVVPTS 535
                     .|..|::|..:...|:|.|
pombe   549 ---------IMGGVSIFAIICTIVIPKS 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 112/597 (19%)
thi9NP_593353.1 2A0304 64..559 CDD:273331 106/541 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I2614
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I1915
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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