DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and isp5

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_595000.1 Gene:isp5 / 2543028 PomBaseID:SPAC1039.09 Length:580 Species:Schizosaccharomyces pombe


Alignment Length:587 Identity:130/587 - (22%)
Similarity:210/587 - (35%) Gaps:143/587 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NNRG-HNVPTKTTSNGTMCANGSLG------TEGPEAPETDSS------GTGRMRKPLER----- 69
            ||.| .::.|..|.:.|    ||:.      .:.||..:.|:|      |.|.:....||     
pombe     2 NNYGVSSIGTSLTPSPT----GSIDEYTSKEVKHPEDVKVDASYEKEEVGYGELEVVPERGNLFQ 62

  Fly    70 ----------NGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWL 124
                      :|..|.    |:|.|.......:.:|..||:|::|.....| |.|......|.:.
pombe    63 RWYRSFLPPEDGKPQK----LKRTLTARHIQMIGIGGAIGTGVWVGSKNTL-REGGAASVLICYS 122

  Fly   125 ACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSW---VSTLVLKPSQM--AIICL 184
            ..|.:.|:...:..||......:|:...|......|:..|...|   .|.|...|.::  |.|||
pombe   123 LVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHPSWGFTLGWNYLASFLATYPLELITASICL 187

  Fly   185 SF-AQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVV----- 243
            .| .......::|              |.|.::.|||.:.|.....|:...::.|::|:|     
pombe   188 QFWININSGIWIT--------------VFIALLCFVNMFGVRGYGEVEFFVSSLKVMAMVGFIIC 238

  Fly   244 --VVICGGAWKLMQGNTQH---------LSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTE 297
              |:.|||.      .|.|         ..|||   :.......:.|.|..::|.|...:.....
pombe   239 GIVIDCGGV------RTDHRGYIGATIFRKNAF---IHGFHGFCSVFSTAAFSYAGTEYIGIAAS 294

  Fly   298 EIKNPSKNLPRSIIIGIPLVTLCY--ALINISYLAAMSPQEMIESEAVAVT------FGNRILGA 354
            |.|||:|..|:::......|:|.|  ||..:|.|.:...:.:....|.|.:      ...:|.| 
pombe   295 ETKNPAKAFPKAVKQVFIRVSLFYILALFVVSLLISGRDERLTTLSATAASPFILALMDAKIRG- 358

  Fly   355 LAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAM 419
            |..::...:.||...:|||..:...|...:.:.:||......||. |...|        |:|.|.
pombe   359 LPHVLNAVILISVLTAANGITYTGSRTLHSMAEQGHAPKWFKYVD-REGRP--------LLAMAF 414

  Fly   420 VL-HGTI---------DSLIDFF-------SFTAWIFYGGAMLALIVMR---------YTKPNYP 458
            || .|.:         |::.|:.       :...|:   ...::.|:.|         |.:..|.
pombe   415 VLCFGALGYICESAQSDTVFDWLLSISNLATLFVWL---SINVSYIIYRLAFKKQGKSYDEVGYH 476

  Fly   459 RPYKV-----PIIIPVVVLVISVYLVAAPIFETPRV-----EYL----YALLFIFAGLIFYVPFV 509
            .|:.:     ...|.::|.:...|:...||..:|..     .||    ..::||...||....|.
pombe   477 SPFGIYGACYGAFIIILVFITEFYVSIFPIGASPDAGAFFQSYLCFPVVVIVFIAHALITRQKFR 541

  Fly   510 KL 511
            ||
pombe   542 KL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 120/550 (22%)
isp5NP_595000.1 LysP 37..579 CDD:223903 120/548 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.