DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and SPAC1039.01

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001342936.1 Gene:SPAC1039.01 / 2542956 PomBaseID:SPAC1039.01 Length:567 Species:Schizosaccharomyces pombe


Alignment Length:489 Identity:108/489 - (22%)
Similarity:180/489 - (36%) Gaps:137/489 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 RRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIW--------LACGVLSLLGALAYA 138
            |:|.|| |:..|..:::|....|: |.|:.....||...::|        |.|..:|:      |
pombe    63 RQLSLF-GIFSISFSVLGMLPSVA-STLVFGLWYVGYPGLLWAWLIAMFFLICVSMSM------A 119

  Fly   139 EL-GTMNTSSGAEWA---YFMDAYGPAPAFLFSW---VSTLVLKPSQMAIICLSFAQYAVEAFVT 196
            |: ..|.||.|..:|   :....:||..:::..|   :..::.:||     ..|.|...:...||
pombe   120 EICSAMPTSGGLYYAAAVFAPKGWGPLASWITGWSNYIGNIIGQPS-----VNSSAASMILGAVT 179

  Fly   197 ECDPPRGVVKMVALVAIVMILFVNCYSVNL---------GMAVQNVFTAAKLVAVVVVICGGA-- 250
            ...|...:.:....:..|.|...||....|         |:|.. :.||...:|.:.::..|.  
pombe   180 VNRPDFVIQRWQWFLLAVAIQCFNCVLACLPTRIISRINGVATY-LNTAFLFIAGITILAYGGKN 243

  Fly   251 ---------WKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNL 306
                     |......||         .|...||..:|.:.:|...|::...:::||..|.|.|.
pombe   244 HNFVKGTKIWGDYINTTQ---------WPTGFAILLSFNSPIWTMSGYDAPFHLSEECSNASVNA 299

  Fly   307 PRSI----IIG-----IPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWLMP-- 360
            |::|    :||     |..:.:.|.|.:|              ::|..|.|:.....|...||  
pombe   300 PKAIVMTAVIGGVVGWIMQIIVAYTLTDI--------------DSVMNTSGSMWTAYLVQAMPPK 350

  Fly   361 -----LSVT-ISTFGSANGTLFAAGRLCFAASREGHLLDILSYV-HVRRLTPAPGLIFHSLIASA 418
                 ||:| ||........|.|:.|:.::.:|:| :|....:: .|...|..|        .:|
pombe   351 AALGILSLTIISAIIMGQSALIASSRIAYSYARDG-ILPFSGWIGTVNPYTQTP--------VNA 406

  Fly   419 MVLHGTIDSLIDFFSFTAW-----IFYGGAMLALIVMRYTKPNYPRPYKVPIII----------- 467
            ::.:..|..||.|.:|...     :|..||:.|.|.           :.|||.|           
pombe   407 VICNCIISILILFLTFAGTVTLDAVFSVGAVAAFIA-----------FTVPIAIRVFFTKDADFR 460

  Fly   468 -----------PVVVLVISVYLVAAPIFETPRVE 490
                       |:.:|.:|...:..||...|.|:
pombe   461 RGPWNLGKFSRPIGLLAVSFVALMIPILCFPSVK 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 108/489 (22%)
SPAC1039.01NP_001342936.1 2A0304 52..530 CDD:330979 108/489 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I2614
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I1915
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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