DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and SPAC11D3.08c

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_592805.1 Gene:SPAC11D3.08c / 2542911 PomBaseID:SPAC11D3.08c Length:550 Species:Schizosaccharomyces pombe


Alignment Length:495 Identity:109/495 - (22%)
Similarity:190/495 - (38%) Gaps:106/495 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 FSGVALIVGTMIGS-GIFVSPSGLLVRTGSVGVSFIIW---LAC----GVLSLLGALAYAELGTM 143
            ||.|: |.|...|| |:..:.:|.|:.:.:.|...::|   :.|    .|...||.||    .:|
pombe    48 FSYVS-IFGQSFGSMGLCPAMAGSLIFSMNCGGGGMVWSWIIGCICLIPVSISLGELA----SSM 107

  Fly   144 NTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIIC-----LSFAQYA------------- 190
            .||.|                |:.|:.||. .||..|.:|     :|...||             
pombe   108 PTSGG----------------LYFWIFTLA-SPSSRAFLCWVCGYVSVLGYATIYASTVYSASSM 155

  Fly   191 VEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLG---MAVQNV--FTAAKLVAVVVVICGGA 250
            |:|......|.....|.........:|||......:.   :|..|:  .|...||:::::|.   
pombe   156 VQALAVIGSPSYSPTKYEQYGIYAALLFVISAMTAIPSRVIAKVNIINITFQFLVSIILIIA--- 217

  Fly   251 WKLMQGNTQHLSNA----------FNGPMPNVG-AIATAFYTGLWAYDGWNNLNYVTEEIKNPSK 304
              |..|:.....|:          ::| ..|:| |...:|.|.:|...|:.:...|.||..|.:|
pombe   218 --LAAGSDSTTRNSGSFIFGDFTNYSG-WSNMGWAFILSFTTPVWVVSGFESSAAVAEESTNAAK 279

  Fly   305 NLPRSIIIGIPLVTLCYALINISYLAAM---------SPQEMIESEAVAVTFGNRILGALAWLMP 360
            ..|.::|..:.:.|:....|.|:.:|.|         |......::.:....||:  |||.....
pombe   280 AAPFAMISSLGVATILGWCIVITVVATMGHDFNAILGSSLGQPVAQVLVNNVGNK--GALGIFSL 342

  Fly   361 LSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLT----PAPGL---IFHSLIASA 418
            |.:.:..  :....|.||.|..||..|:|   .|....::|.||    |...:   :.:||:...
pombe   343 LVIALCL--NCISLLIAASREVFAFCRDG---GIPGSRYLRLLTKQKVPLNAILLVLLYSLLVGL 402

  Fly   419 MVLHG--TIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPN--YPRPYKVPIII-PVVVLVISVYL 478
            ::|..  .|.|:.:......:|.|.|.::...|....:|.  |...:..|..: .:|.:...:.:
pombe   403 LILVNVTAISSVFNLAIIALYIAYSGPLMCRFVYNKFQPGVFYVGKWSKPAALWSLVWMWFMILM 467

  Fly   479 VAAPIFETPRVE------YLYALLFIFAGLIFYVPFVKLG 512
            :..|.::.|..:      .:...:.:|..:.:|:|  |:|
pombe   468 LLFPQYQKPNQDEMNWAIVVLGFVMVFCVVYYYLP--KIG 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 109/495 (22%)
SPAC11D3.08cNP_592805.1 2A0304 35..513 CDD:273331 109/495 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I1915
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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