DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and per1

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_594316.1 Gene:per1 / 2541596 PomBaseID:SPAP7G5.06 Length:583 Species:Schizosaccharomyces pombe


Alignment Length:531 Identity:103/531 - (19%)
Similarity:178/531 - (33%) Gaps:143/531 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 TQNHVVHLERRLGLF--------SGVAL------------IVGTMIGSGIFVSPSGLLVRTGSVG 117
            |.:|...|::....|        .||||            .:|..||:|:||.....|...|...
pombe    53 TPSHQNFLQKFFSDFKPVKADREDGVALKRHLKGRHMQMIAIGGAIGTGLFVGSGSSLADGGPAS 117

  Fly   118 VSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSW---VSTLVLKPSQM 179
            | .|.:...|::......|..||......:|..:.|.:....||..|...|   ::..|..|.::
pombe   118 V-IIDYTLIGIMMFFTVYALGELAVSYPVAGGFYNYAVRFIDPAWGFAVGWNYFMNYFVTFPLEL 181

  Fly   180 AIICLSFAQYAVE----AFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLV 240
            ....::| :|..:    |::|              :.:|.::.:|.:.|.....|:.:.:..|:|
pombe   182 TTCAITF-RYWTDINSCAWIT--------------IFLVFVICINLFGVRGYGEVEFILSTLKVV 231

  Fly   241 A-------VVVVICGGAWKLMQG-------NTQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNN 291
            |       .:::.|||.....:|       ..:...::|.|       ..:.|.|..:::.|...
pombe   232 ATTGFIILAIIINCGGVPTDPRGYIGGKIIKNKPFRHSFKG-------FCSVFTTAGFSFSGTEV 289

  Fly   292 LNYVTEEIKNPSKNLPRS-----------IIIGIPLVTLCYA-----LINISYLAAMSPQEMIES 340
            :.....|.::|.|:|||:           .::.:.|:.|..:     |:..|...:.||..:...
pombe   290 VGLAAAEAEDPQKSLPRATKQVFWRIAIFYVVSLILIGLLVSPDDPRLMGNSSDGSTSPFVLAIK 354

  Fly   341 EAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSY-------- 397
            ||       .|.| |..:....:.|||...||...|.|.|...|.:.:|......:|        
pombe   355 EA-------NIRG-LPSVFNAVIIISTVSVANSCTFTASRTLHAMAAKGDAPRFFAYTDRLGRPL 411

  Fly   398 ------------VHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVM 450
                        .::.........:|..|:|        |..:.:|||      :|...|..||.
pombe   412 LAMAVCLLFGFFAYINAAGDVSDTVFDWLLA--------ISGISNFFS------WGSINLCHIVF 462

  Fly   451 RYTKPNYPRPY--------------KVPIIIPVVVLVISVYLVAAPIFETPRVE-----YLYALL 496
            |.......|..              .:.:...::.|:...|:...||...|...     ||.|.:
pombe   463 RLAMKKQGRSLDQLGFVSPMGIWGSAIGLAFNILCLMAEFYVSLFPIGSKPNANDFFQGYLAAPI 527

  Fly   497 FI--FAGLIFY 505
            .|  |.|...|
pombe   528 VIAFFIGYKIY 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 103/531 (19%)
per1NP_594316.1 LysP 35..582 CDD:223903 103/531 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

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